EnhancerDB
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  3. vista49555[chr5:147616301-147616769]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49555[chr5:147616301-147616769]
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Tissue distribution of vista49555
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Transcription factor that possibly regulate vista49555[chr5:147616301-147616769]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 147616307 147616327 PPARG JASPAR yes 70734285
chr5 147616314 147616318 YY1 TRANSFAC yes 70734286
chr5 147616329 147616333 TEAD2 TRANSFAC yes 70734287
chr5 147616329 147616334 TBP TRANSFAC yes 70734288
chr5 147616368 147616378 GSC2 JASPAR yes 70734289
chr5 147616368 147616378 GSC JASPAR yes 70734290
chr5 147616369 147616377 OTX1 JASPAR yes 70734291
chr5 147616369 147616377 OTX2 JASPAR yes 70734292
chr5 147616369 147616378 PITX3 JASPAR yes 70734293
chr5 147616375 147616390 JUND JASPAR yes 70734294
chr5 147616376 147616389 JUN JASPAR yes 70734295
chr5 147616380 147616400 TBX19 JASPAR yes 70734296
chr5 147616382 147616398 T JASPAR yes 70734297
chr5 147616389 147616400 USF1 JASPAR yes 70734298
chr5 147616389 147616400 USF2 JASPAR yes 70734299
chr5 147616391 147616406 RFX5 JASPAR yes 70734300
chr5 147616399 147616404 TFAP2A TRANSFAC yes 70734301
chr5 147616399 147616405 MZF1 JASPAR yes 70734302
chr5 147616401 147616407 MAZ TRANSFAC yes 70734303
chr5 147616418 147616432 TLX1 JASPAR yes 70734304
chr5 147616431 147616436 ETS2 TRANSFAC yes 70734305
chr5 147616431 147616441 TEAD1 JASPAR yes 70734306
chr5 147616431 147616441 TEAD4 JASPAR yes 70734307
chr5 147616432 147616440 TEAD3 JASPAR yes 70734308
chr5 147616451 147616465 GATA2 JASPAR yes 70734309
chr5 147616453 147616461 GATA3 JASPAR yes 70734310
chr5 147616453 147616461 GATA5 JASPAR yes 70734311
chr5 147616463 147616475 PBX1 JASPAR yes 70734312
chr5 147616474 147616487 NFKB1 JASPAR yes 70734313
chr5 147616474 147616487 NFKB2 JASPAR yes 70734314
chr5 147616475 147616486 NFKB1 JASPAR yes 70734315
chr5 147616475 147616488 NFKB1 JASPAR yes 70734316
chr5 147616475 147616488 NFKB2 JASPAR yes 70734317
chr5 147616476 147616486 NFKB1 JASPAR yes 70734318
chr5 147616476 147616486 RELA JASPAR yes 70734319
chr5 147616476 147616487 NFKB1 JASPAR yes 70734320
chr5 147616478 147616483 H4TF1 TRANSFAC yes 70734321
chr5 147616488 147616492 TEAD2 TRANSFAC yes 70734322
chr5 147616488 147616493 TBP TRANSFAC yes 70734323
chr5 147616497 147616509 TAL1 JASPAR yes 70734324
chr5 147616523 147616539 SOX4 JASPAR yes 70734325
chr5 147616527 147616542 AR JASPAR yes 70734326
chr5 147616546 147616555 THAP1 JASPAR yes 70734327
chr5 147616555 147616566 PHOX2A JASPAR yes 70734328
chr5 147616557 147616568 HOXA10 JASPAR yes 70734329
chr5 147616558 147616568 MNX1 JASPAR yes 70734330
chr5 147616559 147616567 BARX1 JASPAR yes 70734331
chr5 147616568 147616582 PLAG1 JASPAR yes 70734332
chr5 147616576 147616580 H4TF2 TRANSFAC yes 70734333
chr5 147616578 147616595 ZNF410 JASPAR yes 70734334
chr5 147616587 147616600 ZBTB18 JASPAR yes 70734335
chr5 147616701 147616712 HOXA10 JASPAR yes 70734336
chr5 147616702 147616711 CDX1 JASPAR yes 70734337
chr5 147616702 147616712 HOXA13 JASPAR yes 70734338
chr5 147616702 147616712 HOXD13 JASPAR yes 70734339
chr5 147616703 147616714 PROP1 JASPAR yes 70734340
chr5 147616723 147616726 MYB TRANSFAC yes 70734341
chr5 147616729 147616743 MTF1 JASPAR yes 70734342
chr5 147616735 147616746 FOXB1 JASPAR yes 70734343
chr5 147616739 147616747 FOXL1 JASPAR yes 70734344
chr5 147616739 147616750 FOXB1 JASPAR yes 70734345
chr5 147616741 147616749 FOXL1 JASPAR yes 70734346
SNP sites on vista49555[chr5:147616301-147616769]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 147616323 rs193137223 C T
PPARG
8600741
chr5 147616373 rs10037138 A T
GSC GSC2 OTX1 OTX2 PITX3
8600742
chr5 147616389 rs2895730 T G
JUN JUND T TBX19 USF1 USF2
8600743
chr5 147616479 rs371421457 G T
H4TF1 NFKB1 NFKB2 RELA
8600744
chr5 147616563 rs11299716 AT A
BARX1 HOXA10 MNX1 PHOX2A
8600745
chr5 147616563 rs796476627 AT A
BARX1 HOXA10 MNX1 PHOX2A
8600746
chr5 147616566 rs12655207 G A
BARX1 HOXA10 MNX1 PHOX2A
8600747
chr5 147616622 rs12653739 T C no 8600748
chr5 147616665 rs192177269 C T no 8600749
chr5 147616755 rs200155774 GTGTA G no 8600750
chr5 147616761 rs145068746 G GTA no 8600751
chr5 147616761 rs200777145 GTGTATA G no 8600752
chr5 147616761 rs66764451 G GTA no 8600753
chr5 147616763 rs2195927 G A no 8600754
Genes possibly regulated by vista49555[chr5:147616301-147616769]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 147549296 147554961 + SPINK14 ENSG00000196800.2 147549296 0.0 0.0 5851 32995
chr5 147582357 147594700 + SPINK6 ENSG00000178172.2 147582357 1.0 0.93 5852 66056
chr5 147647743 147665817 + SPINK13 ENSG00000214510.5 147647743 0.83 0.92 5853 69026
chr5 147691982 147695485 + SPINK7 ENSG00000145879.6 147691982 0.99 1.0 5854 24787
chr5 147698550 147701891 + AC091948.1 ENSG00000268126.1 147698550 0.0 0.0 5855 18219
chr5 147700766 147719412 + SPINK9 ENSG00000204909.3 147700766 0.9 0.84 5856 16003
Expression level of Genes
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miRNAs possibly regulated by vista49555[chr5:147616301-147616769]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results