EnhancerDB
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  3. vista49556[chr5:147621065-147621397]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49556[chr5:147621065-147621397]
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Tissue distribution of vista49556
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Transcription factor that possibly regulate vista49556[chr5:147621065-147621397]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 147621082 147621097 MEF2C JASPAR yes 70734347
chr5 147621085 147621100 FOXP1 JASPAR yes 70734348
chr5 147621086 147621101 FOXP1 JASPAR yes 70734349
chr5 147621086 147621107 IRF1 JASPAR yes 70734350
chr5 147621087 147621102 FOXP1 JASPAR yes 70734351
chr5 147621087 147621108 IRF1 JASPAR yes 70734352
chr5 147621088 147621103 FOXP1 JASPAR yes 70734353
chr5 147621088 147621109 IRF1 JASPAR yes 70734354
chr5 147621089 147621104 FOXP1 JASPAR yes 70734355
chr5 147621089 147621110 IRF1 JASPAR yes 70734356
chr5 147621090 147621105 FOXP1 JASPAR yes 70734357
chr5 147621090 147621111 IRF1 JASPAR yes 70734358
chr5 147621091 147621106 FOXP1 JASPAR yes 70734359
chr5 147621092 147621107 FOXP1 JASPAR yes 70734360
chr5 147621094 147621115 IRF1 JASPAR yes 70734361
chr5 147621095 147621116 IRF1 JASPAR yes 70734362
chr5 147621096 147621117 IRF1 JASPAR yes 70734363
chr5 147621103 147621108 ETS2 TRANSFAC yes 70734364
chr5 147621121 147621125 H1TF2 TRANSFAC yes 70734365
chr5 147621121 147621125 NFE TRANSFAC yes 70734366
chr5 147621121 147621125 SRF TRANSFAC yes 70734367
chr5 147621137 147621144 NKX3-1 JASPAR yes 70734368
chr5 147621138 147621146 FOXC1 JASPAR yes 70734369
chr5 147621152 147621165 DUXA JASPAR yes 70734370
chr5 147621153 147621164 DUX4 JASPAR yes 70734371
chr5 147621157 147621171 POU1F1 JASPAR yes 70734372
chr5 147621158 147621170 POU3F2 JASPAR yes 70734373
chr5 147621159 147621163 YY1 TRANSFAC yes 70734374
chr5 147621159 147621171 POU2F1 JASPAR yes 70734375
chr5 147621164 147621176 FOXI1 JASPAR yes 70734376
chr5 147621167 147621171 YY1 TRANSFAC yes 70734377
chr5 147621167 147621177 HOXA13 JASPAR yes 70734378
chr5 147621168 147621179 CDX2 JASPAR yes 70734379
chr5 147621169 147621183 ONECUT2 JASPAR yes 70734380
chr5 147621169 147621183 ONECUT3 JASPAR yes 70734381
chr5 147621172 147621181 SRY JASPAR yes 70734382
chr5 147621188 147621198 POU6F2 JASPAR yes 70734383
chr5 147621189 147621206 ZNF410 JASPAR yes 70734384
chr5 147621192 147621196 YY1 TRANSFAC yes 70734385
chr5 147621202 147621206 TEAD2 TRANSFAC yes 70734386
chr5 147621250 147621254 YY1 TRANSFAC yes 70734387
chr5 147621255 147621259 YY1 TRANSFAC yes 70734388
chr5 147621260 147621264 LFA1 TRANSFAC yes 70734389
chr5 147621267 147621272 SP1 TRANSFAC yes 70734390
chr5 147621292 147621303 CDX2 JASPAR yes 70734391
chr5 147621294 147621303 CDX1 JASPAR yes 70734392
chr5 147621294 147621304 HOXA13 JASPAR yes 70734393
chr5 147621294 147621304 HOXB13 JASPAR yes 70734394
chr5 147621294 147621304 HOXD13 JASPAR yes 70734395
chr5 147621296 147621300 TEAD2 TRANSFAC yes 70734396
chr5 147621296 147621301 TBP TRANSFAC yes 70734397
chr5 147621296 147621302 TFIID TRANSFAC yes 70734398
chr5 147621300 147621306 HiNF-A TRANSFAC yes 70734399
chr5 147621319 147621332 ZBED1 JASPAR yes 70734400
chr5 147621326 147621340 FOXF2 JASPAR yes 70734401
chr5 147621328 147621332 YY1 TRANSFAC yes 70734402
chr5 147621340 147621351 CEBPA JASPAR yes 70734403
chr5 147621351 147621365 RORA JASPAR yes 70734404
chr5 147621351 147621366 MEF2C JASPAR yes 70734405
chr5 147621352 147621367 MEF2A JASPAR yes 70734406
chr5 147621352 147621373 IRF1 JASPAR yes 70734407
chr5 147621354 147621369 IRF9 JASPAR yes 70734408
chr5 147621358 147621379 IRF1 JASPAR yes 70734409
chr5 147621374 147621378 TEAD2 TRANSFAC yes 70734410
chr5 147621376 147621379 MYB TRANSFAC yes 70734411
chr5 147621376 147621395 CTCF JASPAR yes 70734412
SNP sites on vista49556[chr5:147621065-147621397]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 147621087 rs374080931 CAA C
FOXP1 IRF1 MEF2C
8600756
chr5 147621087 rs71001486 CAA C
FOXP1 IRF1 MEF2C
8600757
chr5 147621087 rs746501960 CAA C
FOXP1 IRF1 MEF2C
8600758
chr5 147621117 rs180909935 A G
IRF1
8600759
chr5 147621138 rs9325090 A G
FOXC1 NKX3-1
8600760
chr5 147621151 rs1432695 C A no 8600761
chr5 147621155 rs1432696 G C
DUX4 DUXA
8600762
chr5 147621166 rs1432697 C T
FOXI1 POU1F1 POU2F1 POU3F2
8600763
chr5 147621325 rs151145490 G A
ZBED1
8600764
chr5 147621354 rs115630104 G A
IRF1 IRF9 MEF2A MEF2C RORA
8600765
Genes possibly regulated by vista49556[chr5:147621065-147621397]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 147549296 147554961 + SPINK14 ENSG00000196800.2 147549296 0.0 0.0 5851 28231
chr5 147582357 147594700 + SPINK6 ENSG00000178172.2 147582357 1.0 0.93 5852 61292
chr5 147647743 147665817 + SPINK13 ENSG00000214510.5 147647743 0.83 0.92 5853 73654
chr5 147691982 147695485 + SPINK7 ENSG00000145879.6 147691982 0.99 1.0 5854 29415
chr5 147698550 147701891 + AC091948.1 ENSG00000268126.1 147698550 0.0 0.0 5855 22847
chr5 147700766 147719412 + SPINK9 ENSG00000204909.3 147700766 0.9 0.84 5856 20631
Expression level of Genes
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miRNAs possibly regulated by vista49556[chr5:147621065-147621397]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results