EnhancerDB
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  3. vista49580[chr5:148336270-148336420]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49580[chr5:148336270-148336420]
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Tissue distribution of vista49580
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Transcription factor that possibly regulate vista49580[chr5:148336270-148336420]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 148336257 148336277 PPARG JASPAR yes 66776835
chr5 148336257 148336277 PPARG JASPAR yes 70735573
chr5 148336284 148336304 PPARG JASPAR yes 66776836
chr5 148336284 148336304 PPARG JASPAR yes 70735574
chr5 148336305 148336315 POU6F2 JASPAR yes 66776837
chr5 148336305 148336315 POU6F2 JASPAR yes 70735575
chr5 148336306 148336316 EMX1 JASPAR yes 66776838
chr5 148336306 148336316 GSX2 JASPAR yes 66776839
chr5 148336306 148336316 HOXA2 JASPAR yes 66776840
chr5 148336306 148336316 HOXB2 JASPAR yes 66776841
chr5 148336306 148336316 HOXB3 JASPAR yes 66776842
chr5 148336306 148336316 LHX2 JASPAR yes 66776843
chr5 148336306 148336316 MEOX1 JASPAR yes 66776844
chr5 148336306 148336316 NOTO JASPAR yes 66776845
chr5 148336306 148336316 EMX1 JASPAR yes 70735576
chr5 148336306 148336316 GSX2 JASPAR yes 70735577
chr5 148336306 148336316 HOXA2 JASPAR yes 70735578
chr5 148336306 148336316 HOXB2 JASPAR yes 70735579
chr5 148336306 148336316 HOXB3 JASPAR yes 70735580
chr5 148336306 148336316 LHX2 JASPAR yes 70735581
chr5 148336306 148336316 MEOX1 JASPAR yes 70735582
chr5 148336306 148336316 NOTO JASPAR yes 70735583
chr5 148336307 148336315 NKX6-1 JASPAR yes 66776846
chr5 148336307 148336315 NKX6-2 JASPAR yes 66776847
chr5 148336307 148336315 NKX6-1 JASPAR yes 70735584
chr5 148336307 148336315 NKX6-2 JASPAR yes 70735585
chr5 148336307 148336321 POU1F1 JASPAR yes 66776848
chr5 148336307 148336321 POU1F1 JASPAR yes 70735586
chr5 148336309 148336313 YY1 TRANSFAC yes 66776849
chr5 148336309 148336313 YY1 TRANSFAC yes 70735587
chr5 148336312 148336315 MYB TRANSFAC yes 66776850
chr5 148336312 148336315 MYB TRANSFAC yes 70735588
chr5 148336313 148336325 POU2F1 JASPAR yes 66776851
chr5 148336313 148336325 POU2F1 JASPAR yes 70735589
chr5 148336319 148336331 TEAD1 JASPAR yes 66776852
chr5 148336319 148336331 TEAD1 JASPAR yes 70735590
chr5 148336345 148336356 NFE2L2 JASPAR yes 66776853
chr5 148336345 148336356 NFE2L2 JASPAR yes 70735591
chr5 148336347 148336355 GATA5 JASPAR yes 66776854
chr5 148336347 148336355 GATA5 JASPAR yes 70735592
chr5 148336353 148336357 YY1 TRANSFAC yes 66776855
chr5 148336353 148336357 YY1 TRANSFAC yes 70735593
chr5 148336358 148336369 EBF1 JASPAR yes 66776856
chr5 148336358 148336369 EBF1 JASPAR yes 70735594
SNP sites on vista49580[chr5:148336270-148336420]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 148336284 rs147289675 C T
PPARG
8604184
chr5 148336305 rs148749193 C G
POU6F2
8604185
chr5 148336384 rs374270068 T C no 8604186
Genes possibly regulated by vista49580[chr5:148336270-148336420]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista49580[chr5:148336270-148336420]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results