EnhancerDB
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  3. vista49581[chr5:148349939-148350092]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49581[chr5:148349939-148350092]
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Tissue distribution of vista49581
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Transcription factor that possibly regulate vista49581[chr5:148349939-148350092]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 148349927 148349939 TEAD1 JASPAR yes 66778511
chr5 148349927 148349939 TEAD1 JASPAR yes 70735595
chr5 148349929 148349939 TEAD4 JASPAR yes 66778512
chr5 148349929 148349939 TEAD4 JASPAR yes 70735596
chr5 148349940 148349956 SOX4 JASPAR yes 66778514
chr5 148349940 148349956 SOX4 JASPAR yes 70735597
chr5 148349941 148349956 SOX21 JASPAR yes 66778515
chr5 148349941 148349956 SOX21 JASPAR yes 70735598
chr5 148349941 148349957 SOX4 JASPAR yes 66778516
chr5 148349941 148349957 SOX4 JASPAR yes 70735599
chr5 148349946 148349950 LFA1 TRANSFAC yes 66778517
chr5 148349946 148349950 LFA1 TRANSFAC yes 70735600
chr5 148349948 148349957 SOX9 JASPAR yes 66778518
chr5 148349948 148349957 SOX9 JASPAR yes 70735601
chr5 148349948 148349967 RFX2 JASPAR yes 66778519
chr5 148349948 148349967 RFX2 JASPAR yes 70735602
chr5 148349956 148349971 HSF1 JASPAR yes 66778520
chr5 148349956 148349971 HSF1 JASPAR yes 70735603
chr5 148349965 148349979 E2F7 JASPAR yes 66778521
chr5 148349965 148349979 E2F7 JASPAR yes 70735604
chr5 148349966 148349978 E2F8 JASPAR yes 66778522
chr5 148349966 148349978 E2F8 JASPAR yes 70735605
chr5 148349966 148349981 NFYB JASPAR yes 66778523
chr5 148349966 148349981 NFYB JASPAR yes 70735606
chr5 148349973 148349977 H1TF2 TRANSFAC yes 66778524
chr5 148349973 148349977 NFE TRANSFAC yes 66778525
chr5 148349973 148349977 SRF TRANSFAC yes 66778526
chr5 148349973 148349977 H1TF2 TRANSFAC yes 70735607
chr5 148349973 148349977 NFE TRANSFAC yes 70735608
chr5 148349973 148349977 SRF TRANSFAC yes 70735609
chr5 148349993 148350003 MYF6 JASPAR yes 66778527
chr5 148349993 148350003 MYF6 JASPAR yes 70735610
chr5 148350009 148350013 YY1 TRANSFAC yes 66778528
chr5 148350009 148350013 YY1 TRANSFAC yes 70735611
chr5 148350017 148350021 NFE TRANSFAC yes 66778529
chr5 148350017 148350021 NFE TRANSFAC yes 70735612
chr5 148350018 148350032 TLX1 JASPAR yes 66778530
chr5 148350018 148350032 TLX1 JASPAR yes 70735613
chr5 148350021 148350025 YY1 TRANSFAC yes 66778531
chr5 148350021 148350025 YY1 TRANSFAC yes 70735614
chr5 148350058 148350074 ZNF143 JASPAR yes 66778532
chr5 148350058 148350074 ZNF143 JASPAR yes 70735615
chr5 148350068 148350081 SCRT2 JASPAR yes 66778533
chr5 148350068 148350081 SCRT2 JASPAR yes 70735616
chr5 148350068 148350083 SCRT1 JASPAR yes 66778534
chr5 148350068 148350083 SCRT1 JASPAR yes 70735617
chr5 148350083 148350097 E2F7 JASPAR yes 66778535
chr5 148350083 148350097 E2F7 JASPAR yes 70735618
chr5 148350084 148350095 E2F1 JASPAR yes 66778536
chr5 148350084 148350095 E2F1 JASPAR yes 70735619
chr5 148350088 148350096 E2F1 JASPAR yes 66778537
chr5 148350088 148350096 E2F1 JASPAR yes 70735620
SNP sites on vista49581[chr5:148349939-148350092]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 148350021 rs17795050 T C
NFE TLX1 YY1
8604407
chr5 148350061 rs568895299 C G
ZNF143
8604408
chr5 148350091 rs189036905 G A
E2F1 E2F7
8604409
Genes possibly regulated by vista49581[chr5:148349939-148350092]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 148303202 148442726 - SH3TC2 ENSG00000169247.7 148442726 0.96 1.0 5860 7366
Expression level of Genes
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miRNAs possibly regulated by vista49581[chr5:148349939-148350092]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results