EnhancerDB
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  3. vista49583[chr5:148505231-148505419]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49583[chr5:148505231-148505419]
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Tissue distribution of vista49583
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Transcription factor that possibly regulate vista49583[chr5:148505231-148505419]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 148504808 148505245 CTCF UCSC Txn Factor no Conserved 108536888
chr5 148505246 148505266 TP53 JASPAR yes 66790243
chr5 148505246 148505266 TP53 JASPAR yes 70735676
chr5 148505261 148505266 H4TF1 TRANSFAC yes 66790244
chr5 148505261 148505266 H4TF1 TRANSFAC yes 70735677
chr5 148505261 148505276 RUNX2 JASPAR yes 66790245
chr5 148505261 148505276 RUNX2 JASPAR yes 70735678
chr5 148505279 148505291 TEAD1 JASPAR yes 66790246
chr5 148505279 148505291 TEAD1 JASPAR yes 70735679
chr5 148505281 148505291 TEAD1 JASPAR yes 66790247
chr5 148505281 148505291 TEAD4 JASPAR yes 66790248
chr5 148505281 148505291 TEAD1 JASPAR yes 70735680
chr5 148505281 148505291 TEAD4 JASPAR yes 70735681
chr5 148505282 148505290 TEAD3 JASPAR yes 66790249
chr5 148505282 148505290 TEAD3 JASPAR yes 70735682
chr5 148505337 148505347 HINFP JASPAR yes 66790250
chr5 148505337 148505347 HINFP JASPAR yes 70735683
chr5 148505337 148505349 HINFP JASPAR yes 66790251
chr5 148505337 148505349 HINFP JASPAR yes 70735684
chr5 148505345 148505358 ELF1 JASPAR yes 66790252
chr5 148505345 148505358 ELF1 JASPAR yes 70735685
chr5 148505345 148505366 ZNF263 JASPAR yes 66790253
chr5 148505345 148505366 ZNF263 JASPAR yes 70735686
chr5 148505348 148505358 GABPA JASPAR yes 66790254
chr5 148505348 148505358 GABPA JASPAR yes 70735687
chr5 148505381 148505391 TEAD1 JASPAR yes 66790255
chr5 148505381 148505391 TEAD1 JASPAR yes 70735688
chr5 148505381 148505396 RUNX2 JASPAR yes 66790256
chr5 148505381 148505396 RUNX2 JASPAR yes 70735689
chr5 148505384 148505395 RUNX1 JASPAR yes 66790257
chr5 148505384 148505395 RUNX1 JASPAR yes 70735690
chr5 148505385 148505395 RUNX3 JASPAR yes 66790258
chr5 148505385 148505395 RUNX3 JASPAR yes 70735691
chr5 148505397 148505407 MSC JASPAR yes 66790259
chr5 148505397 148505407 MSC JASPAR yes 70735692
chr5 148505397 148505409 GRHL1 JASPAR yes 66790260
chr5 148505397 148505409 GRHL1 JASPAR yes 70735693
chr5 148505400 148505406 PTF TRANSFAC yes 66790261
chr5 148505400 148505406 PTF TRANSFAC yes 70735694
SNP sites on vista49583[chr5:148505231-148505419]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 148505251 rs116257124 G A
TP53
8605525
chr5 148505269 rs537691679 G A
RUNX2
8605526
chr5 148505318 rs143089157 G C no 8605527
chr5 148505334 rs148213619 C T no 8605528
Genes possibly regulated by vista49583[chr5:148505231-148505419]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 148303202 148442726 - SH3TC2 ENSG00000169247.7 148442726 0.96 1.0 5860 37495
chr5 148521046 148640105 + ABLIM3 ENSG00000173210.15 148521046 0.82 1.0 5861 84373
Expression level of Genes
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miRNAs possibly regulated by vista49583[chr5:148505231-148505419]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results