EnhancerDB
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  3. vista49593[chr5:148552711-148552897]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49593[chr5:148552711-148552897]
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Tissue distribution of vista49593
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Transcription factor that possibly regulate vista49593[chr5:148552711-148552897]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 148552378 148553226 POLR2A UCSC Txn Factor no Conserved 108536907
chr5 148552556 148552835 TAF1 UCSC Txn Factor no Conserved 108536908
chr5 148552642 148552882 USF1 UCSC Txn Factor no Conserved 108536909
chr5 148552698 148552712 EBF1 JASPAR yes 66795350
chr5 148552698 148552712 EBF1 JASPAR yes 70736022
chr5 148552699 148552714 TFAP2C JASPAR yes 66795351
chr5 148552699 148552714 TFAP2C JASPAR yes 70736023
chr5 148552700 148552711 EBF1 JASPAR yes 66795353
chr5 148552700 148552711 EBF1 JASPAR yes 70736024
chr5 148552705 148552715 SP1 JASPAR yes 66795356
chr5 148552705 148552715 SP1 JASPAR yes 70736025
chr5 148552712 148552717 SP1 TRANSFAC yes 66795357
chr5 148552712 148552717 SP1 TRANSFAC yes 70736026
chr5 148552733 148552738 H4TF1 TRANSFAC yes 66795358
chr5 148552733 148552738 H4TF1 TRANSFAC yes 70736027
chr5 148552736 148552748 E2F8 JASPAR yes 66795359
chr5 148552736 148552748 E2F8 JASPAR yes 70736028
chr5 148552740 148552750 SP1 JASPAR yes 66795360
chr5 148552740 148552750 SP1 JASPAR yes 70736029
chr5 148552742 148552747 ETS2 TRANSFAC yes 66795361
chr5 148552742 148552747 ETS2 TRANSFAC yes 70736030
chr5 148552752 148552756 NFE TRANSFAC yes 66795362
chr5 148552752 148552756 NFE TRANSFAC yes 70736031
chr5 148552753 148552763 MAX JASPAR yes 66795363
chr5 148552753 148552763 MAX JASPAR yes 70736032
chr5 148552753 148552764 USF1 JASPAR yes 66795364
chr5 148552753 148552764 USF2 JASPAR yes 66795365
chr5 148552753 148552764 USF1 JASPAR yes 70736033
chr5 148552753 148552764 USF2 JASPAR yes 70736034
chr5 148552754 148552764 TFEB JASPAR yes 66795366
chr5 148552754 148552764 TFEC JASPAR yes 66795367
chr5 148552754 148552764 TFEB JASPAR yes 70736035
chr5 148552754 148552764 TFEC JASPAR yes 70736036
chr5 148552759 148552769 SREBF1 JASPAR yes 66795368
chr5 148552759 148552769 SREBF2 JASPAR yes 66795369
chr5 148552759 148552769 SREBF1 JASPAR yes 70736037
chr5 148552759 148552769 SREBF2 JASPAR yes 70736038
chr5 148552774 148552778 H1TF2 TRANSFAC yes 66795370
chr5 148552774 148552778 NFE TRANSFAC yes 66795371
chr5 148552774 148552778 SRF TRANSFAC yes 66795372
chr5 148552774 148552778 H1TF2 TRANSFAC yes 70736039
chr5 148552774 148552778 NFE TRANSFAC yes 70736040
chr5 148552774 148552778 SRF TRANSFAC yes 70736041
chr5 148552805 148552819 PLAG1 JASPAR yes 66795373
chr5 148552805 148552819 PLAG1 JASPAR yes 70736042
chr5 148552808 148552814 YY1 JASPAR yes 66795374
chr5 148552808 148552814 YY1 JASPAR yes 70736043
chr5 148552817 148552827 NFKB1 JASPAR yes 66795375
chr5 148552817 148552827 NFKB1 JASPAR yes 70736044
chr5 148552821 148552835 EBF1 JASPAR yes 66795376
chr5 148552821 148552835 EBF1 JASPAR yes 70736045
chr5 148552828 148552843 HNF4A JASPAR yes 66795377
chr5 148552828 148552843 HNF4A JASPAR yes 70736046
chr5 148552829 148552844 HNF4G JASPAR yes 66795378
chr5 148552829 148552844 HNF4G JASPAR yes 70736047
chr5 148552849 148552864 HNF4A JASPAR yes 66795379
chr5 148552849 148552864 HNF4A JASPAR yes 70736048
chr5 148552850 148552865 HNF4G JASPAR yes 66795380
chr5 148552850 148552865 HNF4G JASPAR yes 70736049
chr5 148552869 148552874 SP1 TRANSFAC yes 66795381
chr5 148552869 148552874 SP1 TRANSFAC yes 70736050
chr5 148552881 148552896 HNF4G JASPAR yes 66795382
chr5 148552881 148552896 NR2C2 JASPAR yes 66795383
chr5 148552881 148552896 HNF4G JASPAR yes 70736051
chr5 148552881 148552896 NR2C2 JASPAR yes 70736052
chr5 148552887 148552893 NFE2 TRANSFAC yes 66795384
chr5 148552887 148552893 NFE2 TRANSFAC yes 70736053
SNP sites on vista49593[chr5:148552711-148552897]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 148552749 rs10062234 G C
POLR2A SP1 TAF1 USF1
8605989
chr5 148552760 rs146424592 A G
MAX POLR2A SREBF1 SREBF2 TAF1 TFEB TFEC USF1 USF2
8605990
Genes possibly regulated by vista49593[chr5:148552711-148552897]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 148521046 148640105 + ABLIM3 ENSG00000173210.15 148521046 0.82 1.0 5861 68335
chr5 148651434 148721365 + AFAP1L1 ENSG00000157510.9 148651434 0.81 1.0 5862 1463
Expression level of Genes
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miRNAs possibly regulated by vista49593[chr5:148552711-148552897]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results