EnhancerDB
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  3. vista49598[chr5:148668144-148668260]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49598[chr5:148668144-148668260]
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Tissue distribution of vista49598
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Transcription factor that possibly regulate vista49598[chr5:148668144-148668260]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 148668129 148668148 CTCF JASPAR yes 66804090
chr5 148668129 148668148 CTCF JASPAR yes 70736258
chr5 148668168 148668178 NFATC3 JASPAR yes 66804093
chr5 148668168 148668178 NFATC3 JASPAR yes 70736259
chr5 148668169 148668176 NFATC2 JASPAR yes 66804094
chr5 148668169 148668176 NFATC2 JASPAR yes 70736260
chr5 148668173 148668184 ELK4 JASPAR yes 66804095
chr5 148668173 148668184 FLI1 JASPAR yes 66804096
chr5 148668173 148668184 ELK4 JASPAR yes 70736261
chr5 148668173 148668184 FLI1 JASPAR yes 70736262
chr5 148668173 148668186 ELF3 JASPAR yes 66804097
chr5 148668173 148668186 ELF3 JASPAR yes 70736263
chr5 148668174 148668184 ETV6 JASPAR yes 66804098
chr5 148668174 148668184 ETV6 JASPAR yes 70736264
chr5 148668174 148668185 ELF5 JASPAR yes 66804099
chr5 148668174 148668185 ELF5 JASPAR yes 70736265
chr5 148668174 148668186 EHF JASPAR yes 66804100
chr5 148668174 148668186 EHF JASPAR yes 70736266
chr5 148668174 148668187 ELF1 JASPAR yes 66804101
chr5 148668174 148668187 ELF1 JASPAR yes 70736267
chr5 148668175 148668182 SPI1 JASPAR yes 66804102
chr5 148668175 148668182 SPI1 JASPAR yes 70736268
chr5 148668175 148668183 EHF JASPAR yes 66804103
chr5 148668175 148668183 EHF JASPAR yes 70736269
chr5 148668189 148668200 FLI1 JASPAR yes 66804104
chr5 148668189 148668200 FLI1 JASPAR yes 70736270
chr5 148668190 148668194 YY1 TRANSFAC yes 66804105
chr5 148668190 148668194 YY1 TRANSFAC yes 70736271
chr5 148668191 148668199 FEV JASPAR yes 66804106
chr5 148668191 148668199 FEV JASPAR yes 70736272
chr5 148668193 148668198 ETS2 TRANSFAC yes 66804107
chr5 148668193 148668198 ETS2 TRANSFAC yes 70736273
chr5 148668196 148668202 SOX10 JASPAR yes 66804108
chr5 148668196 148668202 SOX10 JASPAR yes 70736274
chr5 148668201 148668208 JUN TRANSFAC yes 66804109
chr5 148668201 148668208 JUN TRANSFAC yes 70736275
chr5 148668204 148668219 SCRT1 JASPAR yes 66804110
chr5 148668204 148668219 ZIC3 JASPAR yes 66804111
chr5 148668204 148668219 ZIC4 JASPAR yes 66804112
chr5 148668204 148668219 SCRT1 JASPAR yes 70736276
chr5 148668204 148668219 ZIC3 JASPAR yes 70736277
chr5 148668204 148668219 ZIC4 JASPAR yes 70736278
chr5 148668205 148668219 ZIC1 JASPAR yes 66804113
chr5 148668205 148668219 ZIC1 JASPAR yes 70736279
chr5 148668213 148668219 PEA3 TRANSFAC yes 66804114
chr5 148668213 148668219 PEA3 TRANSFAC yes 70736280
chr5 148668227 148668233 SOX10 JASPAR yes 66804115
chr5 148668227 148668233 SOX10 JASPAR yes 70736281
chr5 148668230 148668235 ETS2 TRANSFAC yes 66804116
chr5 148668230 148668235 ETS2 TRANSFAC yes 70736282
SNP sites on vista49598[chr5:148668144-148668260]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 148668174 rs1623904 C T
EHF ELF1 ELF3 ELF5 ELK4 ETV6 FLI1 NFATC2 NFATC3
8606851
chr5 148668197 rs531012359 C T
ETS2 FEV FLI1 SOX10
8606852
Genes possibly regulated by vista49598[chr5:148668144-148668260]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 148651434 148721365 + AFAP1L1 ENSG00000157510.9 148651434 0.81 1.0 5862 83290
chr5 148724993 148734146 + GRPEL2 ENSG00000164284.10 148724993 0.7 0.99 5863 43267
chr5 148737570 148749216 + PCYOX1L ENSG00000145882.6 148737570 0.61 1.0 5864 30690
Expression level of Genes
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miRNAs possibly regulated by vista49598[chr5:148668144-148668260]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results