EnhancerDB
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  3. vista49599[chr5:148700478-148700631]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49599[chr5:148700478-148700631]
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Tissue distribution of vista49599
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Transcription factor that possibly regulate vista49599[chr5:148700478-148700631]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 148700311 148700751 TEAD4 UCSC Txn Factor no Conserved 108536912
chr5 148700397 148700673 USF2 UCSC Txn Factor no Conserved 108536913
chr5 148700405 148700652 USF1 UCSC Txn Factor no Conserved 108536914
chr5 148700622 148700902 MAFK UCSC Txn Factor no Conserved 108536915
chr5 148700489 148700504 HNF1A JASPAR yes 66806345
chr5 148700489 148700504 HNF1A JASPAR yes 70736283
chr5 148700490 148700503 HNF1B JASPAR yes 66806346
chr5 148700490 148700503 HNF1B JASPAR yes 70736284
chr5 148700516 148700533 RARA JASPAR yes 66806347
chr5 148700516 148700533 RARA JASPAR yes 70736285
chr5 148700518 148700524 YY1 JASPAR yes 66806348
chr5 148700518 148700524 YY1 JASPAR yes 70736286
chr5 148700520 148700531 USF1 JASPAR yes 66806349
chr5 148700520 148700531 USF2 JASPAR yes 66806350
chr5 148700520 148700531 USF1 JASPAR yes 70736287
chr5 148700520 148700531 USF2 JASPAR yes 70736288
chr5 148700521 148700531 SREBF2 JASPAR yes 66806351
chr5 148700521 148700531 TFE3 JASPAR yes 66806352
chr5 148700521 148700531 TFEB JASPAR yes 66806353
chr5 148700521 148700531 TFEC JASPAR yes 66806354
chr5 148700521 148700531 SREBF2 JASPAR yes 70736289
chr5 148700521 148700531 TFE3 JASPAR yes 70736290
chr5 148700521 148700531 TFEB JASPAR yes 70736291
chr5 148700521 148700531 TFEC JASPAR yes 70736292
chr5 148700521 148700532 USF1 JASPAR yes 66806355
chr5 148700521 148700532 USF1 JASPAR yes 70736293
chr5 148700527 148700537 RORA JASPAR yes 66806356
chr5 148700527 148700537 RORA JASPAR yes 70736294
chr5 148700529 148700541 TEAD1 JASPAR yes 66806357
chr5 148700529 148700541 TEAD1 JASPAR yes 70736295
chr5 148700531 148700541 TEAD4 JASPAR yes 66806358
chr5 148700531 148700541 TEAD4 JASPAR yes 70736296
chr5 148700532 148700540 TEAD3 JASPAR yes 66806359
chr5 148700532 148700540 TEAD3 JASPAR yes 70736297
chr5 148700537 148700557 ESR1 JASPAR yes 66806360
chr5 148700537 148700557 ESR1 JASPAR yes 70736298
chr5 148700542 148700562 ESR1 JASPAR yes 66806361
chr5 148700542 148700562 ESR1 JASPAR yes 70736299
chr5 148700543 148700557 TLX1 JASPAR yes 66806362
chr5 148700543 148700557 TLX1 JASPAR yes 70736300
chr5 148700560 148700564 NFE TRANSFAC yes 66806363
chr5 148700560 148700564 NFE TRANSFAC yes 70736301
chr5 148700592 148700602 TEAD1 JASPAR yes 66806364
chr5 148700592 148700602 TEAD4 JASPAR yes 66806365
chr5 148700592 148700602 TEAD1 JASPAR yes 70736302
chr5 148700592 148700602 TEAD4 JASPAR yes 70736303
chr5 148700592 148700604 TEAD1 JASPAR yes 66806366
chr5 148700592 148700604 TEAD1 JASPAR yes 70736304
chr5 148700593 148700601 TEAD3 JASPAR yes 66806367
chr5 148700593 148700601 TEAD3 JASPAR yes 70736305
chr5 148700598 148700602 H1TF2 TRANSFAC yes 66806368
chr5 148700598 148700602 NFE TRANSFAC yes 66806369
chr5 148700598 148700602 SRF TRANSFAC yes 66806370
chr5 148700598 148700602 H1TF2 TRANSFAC yes 70736306
chr5 148700598 148700602 NFE TRANSFAC yes 70736307
chr5 148700598 148700602 SRF TRANSFAC yes 70736308
chr5 148700611 148700616 SP1 TRANSFAC yes 66806371
chr5 148700611 148700616 SP1 TRANSFAC yes 70736309
chr5 148700614 148700625 FOSL2 JASPAR yes 66806372
chr5 148700614 148700625 FOSL2 JASPAR yes 70736310
chr5 148700615 148700620 SP1 TRANSFAC yes 66806373
chr5 148700615 148700620 SP1 TRANSFAC yes 70736311
chr5 148700617 148700623 ESR1 TRANSFAC yes 66806374
chr5 148700617 148700623 ESR1 TRANSFAC yes 70736312
chr5 148700619 148700623 ESR1 TRANSFAC yes 66806375
chr5 148700619 148700623 ESR1 TRANSFAC yes 70736313
SNP sites on vista49599[chr5:148700478-148700631]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 148700510 rs79428273 G A
TEAD4 USF1 USF2
8607035
chr5 148700583 rs17796401 A C
TEAD4 USF1 USF2
8607036
Genes possibly regulated by vista49599[chr5:148700478-148700631]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 148651434 148721365 + AFAP1L1 ENSG00000157510.9 148651434 0.81 1.0 5862 50956
chr5 148724993 148734146 + GRPEL2 ENSG00000164284.10 148724993 0.7 0.99 5863 75638
chr5 148737570 148749216 + PCYOX1L ENSG00000145882.6 148737570 0.61 1.0 5864 63061
chr5 148750887 148783765 - IL17B ENSG00000127743.5 148783765 0.85 1.0 5865 16866
Expression level of Genes
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miRNAs possibly regulated by vista49599[chr5:148700478-148700631]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results