EnhancerDB
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  3. vista49601[chr5:148760371-148760619]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49601[chr5:148760371-148760619]
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Tissue distribution of vista49601
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Transcription factor that possibly regulate vista49601[chr5:148760371-148760619]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 148760375 148760379 NFE TRANSFAC yes 66807557
chr5 148760375 148760379 NFE TRANSFAC yes 70736361
chr5 148760382 148760386 LFA1 TRANSFAC yes 66807558
chr5 148760382 148760386 LFA1 TRANSFAC yes 70736362
chr5 148760400 148760403 MYB TRANSFAC yes 66807559
chr5 148760400 148760403 MYB TRANSFAC yes 70736363
chr5 148760429 148760441 PKNOX2 JASPAR yes 66807560
chr5 148760429 148760441 TGIF1 JASPAR yes 66807561
chr5 148760429 148760441 TGIF2 JASPAR yes 66807562
chr5 148760429 148760441 PKNOX2 JASPAR yes 70736364
chr5 148760429 148760441 TGIF1 JASPAR yes 70736365
chr5 148760429 148760441 TGIF2 JASPAR yes 70736366
chr5 148760436 148760454 SRF JASPAR yes 66807563
chr5 148760436 148760454 SRF JASPAR yes 70736367
chr5 148760437 148760449 YY1 JASPAR yes 66807564
chr5 148760437 148760449 YY1 JASPAR yes 70736368
chr5 148760438 148760454 SRF JASPAR yes 66807565
chr5 148760438 148760454 SRF JASPAR yes 70736369
chr5 148760438 148760456 SRF JASPAR yes 66807566
chr5 148760438 148760456 SRF JASPAR yes 70736370
chr5 148760439 148760451 SRF JASPAR yes 66807567
chr5 148760439 148760451 SRF JASPAR yes 70736371
chr5 148760441 148760453 SRF JASPAR yes 66807568
chr5 148760441 148760453 SRF JASPAR yes 70736372
chr5 148760444 148760448 YY1 TRANSFAC yes 66807569
chr5 148760444 148760448 YY1 TRANSFAC yes 70736373
chr5 148760449 148760453 ESR1 TRANSFAC yes 66807570
chr5 148760449 148760453 ESR1 TRANSFAC yes 70736374
chr5 148760450 148760462 HNF1B JASPAR yes 66807571
chr5 148760450 148760462 HNF1B JASPAR yes 70736375
chr5 148760482 148760493 NFKB1 JASPAR yes 66807572
chr5 148760482 148760493 NFKB1 JASPAR yes 70736376
chr5 148760483 148760493 RELA JASPAR yes 66807573
chr5 148760483 148760493 REL JASPAR yes 66807574
chr5 148760483 148760493 RELA JASPAR yes 70736377
chr5 148760483 148760493 REL JASPAR yes 70736378
chr5 148760493 148760501 SP1 TRANSFAC yes 66807575
chr5 148760493 148760501 SP1 TRANSFAC yes 70736379
chr5 148760493 148760503 SP1 JASPAR yes 66807576
chr5 148760493 148760503 SP1 JASPAR yes 70736380
chr5 148760495 148760501 MAZ TRANSFAC yes 66807577
chr5 148760495 148760501 MAZ TRANSFAC yes 70736381
chr5 148760496 148760506 MZF1 JASPAR yes 66807578
chr5 148760496 148760506 MZF1 JASPAR yes 70736382
chr5 148760514 148760529 TFAP2C JASPAR yes 66807579
chr5 148760514 148760529 TFAP2C JASPAR yes 70736383
chr5 148760534 148760543 SP1 TRANSFAC yes 66807580
chr5 148760534 148760543 SP1 TRANSFAC yes 70736384
chr5 148760535 148760541 SP1 TRANSFAC yes 66807581
chr5 148760535 148760541 SP1 TRANSFAC yes 70736385
chr5 148760535 148760545 SP1 JASPAR yes 66807582
chr5 148760535 148760545 SP1 JASPAR yes 70736386
chr5 148760536 148760543 SP1 TRANSFAC yes 66807583
chr5 148760536 148760543 SP1 TRANSFAC yes 70736387
chr5 148760537 148760542 SP1 TRANSFAC yes 66807584
chr5 148760537 148760542 SP1 TRANSFAC yes 70736388
chr5 148760537 148760543 SP1 TRANSFAC yes 66807585
chr5 148760537 148760543 SP1 TRANSFAC yes 70736389
chr5 148760537 148760544 SP1 TRANSFAC yes 66807586
chr5 148760537 148760544 SP1 TRANSFAC yes 70736390
chr5 148760543 148760558 ZIC4 JASPAR yes 66807587
chr5 148760543 148760558 ZIC4 JASPAR yes 70736391
chr5 148760544 148760558 ZIC1 JASPAR yes 66807588
chr5 148760544 148760558 ZIC1 JASPAR yes 70736392
chr5 148760553 148760557 NFE TRANSFAC yes 66807589
chr5 148760553 148760557 NFE TRANSFAC yes 70736393
chr5 148760556 148760566 SP1 JASPAR yes 66807590
chr5 148760556 148760566 SP1 JASPAR yes 70736394
chr5 148760557 148760565 SP1 TRANSFAC yes 66807591
chr5 148760557 148760565 SP1 TRANSFAC yes 70736395
chr5 148760563 148760571 SP1 TRANSFAC yes 66807592
chr5 148760563 148760571 SP1 TRANSFAC yes 70736396
chr5 148760579 148760584 SP1 TRANSFAC yes 66807593
chr5 148760579 148760584 SP1 TRANSFAC yes 70736397
SNP sites on vista49601[chr5:148760371-148760619]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 148760549 rs566098710 G A
ZIC1 ZIC4
8607171
Genes possibly regulated by vista49601[chr5:148760371-148760619]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 148724993 148734146 + GRPEL2 ENSG00000164284.10 148724993 0.7 0.99 5863 64622
chr5 148737570 148749216 + PCYOX1L ENSG00000145882.6 148737570 0.61 1.0 5864 77199
chr5 148750887 148783765 - IL17B ENSG00000127743.5 148783765 0.85 1.0 5865 76854
Expression level of Genes
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miRNAs possibly regulated by vista49601[chr5:148760371-148760619]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 148808541 148808561 + hsa-miR-143-3p MIMAT0000435 148786440 1.9271907340669506e-05 0.78961 0.0 1328
Expression level of miRNAs
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