EnhancerDB
  1. Home
  2. Enhancers
  3. vista49603[chr5:148777144-148777405]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49603[chr5:148777144-148777405]
Back to top
Tissue distribution of vista49603
Back to top
Transcription factor that possibly regulate vista49603[chr5:148777144-148777405]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 148777068 148777324 MAFK UCSC Txn Factor no Conserved 108536917
chr5 148777185 148777395 CEBPB UCSC Txn Factor no Conserved 108536918
chr5 148777139 148777150 HOXA10 JASPAR yes 66809635
chr5 148777139 148777150 HOXA10 JASPAR yes 70736427
chr5 148777140 148777149 CDX1 JASPAR yes 66809636
chr5 148777140 148777149 CDX1 JASPAR yes 70736428
chr5 148777140 148777150 HOXA13 JASPAR yes 66809637
chr5 148777140 148777150 HOXB13 JASPAR yes 66809638
chr5 148777140 148777150 HOXD13 JASPAR yes 66809639
chr5 148777140 148777150 HOXA13 JASPAR yes 70736429
chr5 148777140 148777150 HOXB13 JASPAR yes 70736430
chr5 148777140 148777150 HOXD13 JASPAR yes 70736431
chr5 148777149 148777155 HiNF-A TRANSFAC yes 66809640
chr5 148777149 148777155 HiNF-A TRANSFAC yes 70736432
chr5 148777184 148777195 JUND JASPAR yes 66809641
chr5 148777184 148777195 JUND JASPAR yes 70736433
chr5 148777184 148777204 PPARG JASPAR yes 66809642
chr5 148777184 148777204 PPARG JASPAR yes 70736434
chr5 148777206 148777212 GATA3 JASPAR yes 66809643
chr5 148777206 148777212 GATA3 JASPAR yes 70736435
chr5 148777244 148777254 HOXA13 JASPAR yes 66809644
chr5 148777244 148777254 HOXB13 JASPAR yes 66809645
chr5 148777244 148777254 HOXD13 JASPAR yes 66809646
chr5 148777244 148777254 HOXA13 JASPAR yes 70736436
chr5 148777244 148777254 HOXB13 JASPAR yes 70736437
chr5 148777244 148777254 HOXD13 JASPAR yes 70736438
chr5 148777252 148777257 SP1 TRANSFAC yes 66809647
chr5 148777252 148777257 SP1 TRANSFAC yes 70736439
chr5 148777256 148777267 BATF JASPAR yes 66809648
chr5 148777256 148777267 BATF JASPAR yes 70736440
chr5 148777257 148777268 FOSL2 JASPAR yes 66809649
chr5 148777257 148777268 FOSL2 JASPAR yes 70736441
chr5 148777258 148777269 FOSL1 JASPAR yes 66809650
chr5 148777258 148777269 FOSL1 JASPAR yes 70736442
chr5 148777262 148777273 USF2 JASPAR yes 66809651
chr5 148777262 148777273 USF2 JASPAR yes 70736443
chr5 148777263 148777273 TFEB JASPAR yes 66809652
chr5 148777263 148777273 TFEC JASPAR yes 66809653
chr5 148777263 148777273 TFEB JASPAR yes 70736444
chr5 148777263 148777273 TFEC JASPAR yes 70736445
chr5 148777282 148777294 PROX1 JASPAR yes 66809654
chr5 148777282 148777294 PROX1 JASPAR yes 70736446
chr5 148777291 148777304 SCRT2 JASPAR yes 66809655
chr5 148777291 148777304 SCRT2 JASPAR yes 70736447
chr5 148777291 148777306 SCRT1 JASPAR yes 66809656
chr5 148777291 148777306 SCRT1 JASPAR yes 70736448
chr5 148777332 148777346 JUN JASPAR yes 66809657
chr5 148777332 148777346 JUN JASPAR yes 70736449
chr5 148777334 148777345 BATF JASPAR yes 66809658
chr5 148777334 148777345 BATF JASPAR yes 70736450
chr5 148777335 148777346 FOSL2 JASPAR yes 66809659
chr5 148777335 148777346 JUNB JASPAR yes 66809660
chr5 148777335 148777346 FOSL2 JASPAR yes 70736451
chr5 148777335 148777346 JUNB JASPAR yes 70736452
chr5 148777336 148777347 FOS JASPAR yes 66809661
chr5 148777336 148777347 FOSL1 JASPAR yes 66809662
chr5 148777336 148777347 JUND JASPAR yes 66809663
chr5 148777336 148777347 NFE2 JASPAR yes 66809664
chr5 148777336 148777347 FOS JASPAR yes 70736453
chr5 148777336 148777347 FOSL1 JASPAR yes 70736454
chr5 148777336 148777347 JUND JASPAR yes 70736455
chr5 148777336 148777347 NFE2 JASPAR yes 70736456
chr5 148777337 148777346 JDP2 JASPAR yes 66809665
chr5 148777337 148777346 JDP2 JASPAR yes 70736457
chr5 148777348 148777358 NFKB1 JASPAR yes 66809666
chr5 148777348 148777358 NFKB1 JASPAR yes 70736458
chr5 148777365 148777379 PLAG1 JASPAR yes 66809667
chr5 148777365 148777379 PLAG1 JASPAR yes 70736459
chr5 148777366 148777371 SP1 TRANSFAC yes 66809668
chr5 148777366 148777371 SP1 TRANSFAC yes 70736460
chr5 148777394 148777404 MSC JASPAR yes 66809669
chr5 148777394 148777404 MSC JASPAR yes 70736461
SNP sites on vista49603[chr5:148777144-148777405]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 148777151 rs116441294 G T
HiNF-A MAFK
8607384
chr5 148777217 rs532622541 C T
CEBPB MAFK
8607385
chr5 148777280 rs550811818 G A
CEBPB MAFK
8607386
chr5 148777289 rs574350047 G A
CEBPB MAFK PROX1
8607387
chr5 148777303 rs117900866 C T
CEBPB MAFK SCRT1 SCRT2
8607388
chr5 148777332 rs56656949 G A
CEBPB JUN
8607389
chr5 148777376 rs77139269 G C
CEBPB PLAG1
8607390
chr5 148777398 rs534615182 A C
MSC
8607391
Genes possibly regulated by vista49603[chr5:148777144-148777405]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 148724993 148734146 + GRPEL2 ENSG00000164284.10 148724993 0.7 0.99 5863 47849
chr5 148737570 148749216 + PCYOX1L ENSG00000145882.6 148737570 0.61 1.0 5864 60426
chr5 148750887 148783765 - IL17B ENSG00000127743.5 148783765 0.85 1.0 5865 93640
Expression level of Genes
Back to top
miRNAs possibly regulated by vista49603[chr5:148777144-148777405]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 148808541 148808561 + hsa-miR-143-3p MIMAT0000435 148786440 5.4552397577873546e-05 0.78961 0.0 1328
Expression level of miRNAs
Back to top