EnhancerDB
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  3. vista49612[chr5:149045719-149046022]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49612[chr5:149045719-149046022]
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Tissue distribution of vista49612
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Transcription factor that possibly regulate vista49612[chr5:149045719-149046022]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 149045733 149045738 MYC TRANSFAC yes 66835035
chr5 149045733 149045738 MYC TRANSFAC yes 70736671
chr5 149045748 149045762 TCF7L2 JASPAR yes 66835036
chr5 149045748 149045762 TCF7L2 JASPAR yes 70736672
chr5 149045751 149045757 LEF1 TRANSFAC yes 66835037
chr5 149045751 149045757 TCF4 TRANSFAC yes 66835038
chr5 149045751 149045757 LEF1 TRANSFAC yes 70736673
chr5 149045751 149045757 TCF4 TRANSFAC yes 70736674
chr5 149045761 149045771 ERF JASPAR yes 66835039
chr5 149045761 149045771 ERF JASPAR yes 70736675
chr5 149045761 149045775 SPI1 JASPAR yes 66835040
chr5 149045761 149045775 SPIC JASPAR yes 66835041
chr5 149045761 149045775 SPI1 JASPAR yes 70736676
chr5 149045761 149045775 SPIC JASPAR yes 70736677
chr5 149045762 149045769 SPI1 JASPAR yes 66835042
chr5 149045762 149045769 SPI1 JASPAR yes 70736678
chr5 149045768 149045772 YY1 TRANSFAC yes 66835043
chr5 149045768 149045772 YY1 TRANSFAC yes 70736679
chr5 149045789 149045799 POU6F2 JASPAR yes 66835044
chr5 149045789 149045799 POU6F2 JASPAR yes 70736680
chr5 149045793 149045797 YY1 TRANSFAC yes 66835045
chr5 149045793 149045797 YY1 TRANSFAC yes 70736681
chr5 149045842 149045852 HOXC10 JASPAR yes 66835046
chr5 149045842 149045852 HOXD11 JASPAR yes 66835047
chr5 149045842 149045852 HOXC10 JASPAR yes 70736682
chr5 149045842 149045852 HOXD11 JASPAR yes 70736683
chr5 149045842 149045853 HOXA10 JASPAR yes 66835048
chr5 149045842 149045853 HOXC11 JASPAR yes 66835049
chr5 149045842 149045853 HOXC12 JASPAR yes 66835050
chr5 149045842 149045853 HOXD12 JASPAR yes 66835051
chr5 149045842 149045853 HOXA10 JASPAR yes 70736684
chr5 149045842 149045853 HOXC11 JASPAR yes 70736685
chr5 149045842 149045853 HOXC12 JASPAR yes 70736686
chr5 149045842 149045853 HOXD12 JASPAR yes 70736687
chr5 149045843 149045852 CDX1 JASPAR yes 66835052
chr5 149045843 149045852 CDX1 JASPAR yes 70736688
chr5 149045843 149045854 CDX2 JASPAR yes 66835053
chr5 149045843 149045854 CDX2 JASPAR yes 70736689
chr5 149045845 149045857 POU3F1 JASPAR yes 66835054
chr5 149045845 149045857 POU3F1 JASPAR yes 70736690
chr5 149045861 149045865 YY1 TRANSFAC yes 66835055
chr5 149045861 149045865 YY1 TRANSFAC yes 70736691
chr5 149045863 149045874 STAT3 JASPAR yes 66835056
chr5 149045863 149045874 STAT3 JASPAR yes 70736692
chr5 149045863 149045878 MEF2C JASPAR yes 66835057
chr5 149045863 149045878 MEF2C JASPAR yes 70736693
chr5 149045864 149045879 MEF2A JASPAR yes 66835058
chr5 149045864 149045879 MEF2A JASPAR yes 70736694
chr5 149045868 149045882 STAT1 JASPAR yes 66835059
chr5 149045868 149045882 STAT1 JASPAR yes 70736695
chr5 149045868 149045883 STAT2 JASPAR yes 66835060
chr5 149045868 149045883 STAT2 JASPAR yes 70736696
chr5 149045901 149045904 MYB TRANSFAC yes 66835061
chr5 149045901 149045904 MYB TRANSFAC yes 70736697
chr5 149045917 149045929 NHLH1 JASPAR yes 66835062
chr5 149045917 149045929 NHLH1 JASPAR yes 70736698
chr5 149045917 149045932 MAFK JASPAR yes 66835063
chr5 149045917 149045932 MAFK JASPAR yes 70736699
chr5 149045918 149045928 MSC JASPAR yes 66835064
chr5 149045918 149045928 NHLH1 JASPAR yes 66835065
chr5 149045918 149045928 TFAP4 JASPAR yes 66835066
chr5 149045918 149045928 MSC JASPAR yes 70736700
chr5 149045918 149045928 NHLH1 JASPAR yes 70736701
chr5 149045918 149045928 TFAP4 JASPAR yes 70736702
chr5 149045918 149045932 JUN JASPAR yes 66835067
chr5 149045918 149045932 JUN JASPAR yes 70736703
chr5 149045921 149045932 NFE2L2 JASPAR yes 66835068
chr5 149045921 149045932 NFE2L2 JASPAR yes 70736704
chr5 149045922 149045933 FOS JASPAR yes 66835069
chr5 149045922 149045933 FOSL1 JASPAR yes 66835070
chr5 149045922 149045933 JUND JASPAR yes 66835071
chr5 149045922 149045933 FOS JASPAR yes 70736705
chr5 149045922 149045933 FOSL1 JASPAR yes 70736706
chr5 149045922 149045933 JUND JASPAR yes 70736707
chr5 149045923 149045934 FOSL2 JASPAR yes 66835072
chr5 149045923 149045934 JUNB JASPAR yes 66835073
chr5 149045923 149045934 FOSL2 JASPAR yes 70736708
chr5 149045923 149045934 JUNB JASPAR yes 70736709
chr5 149045923 149045937 JUN JASPAR yes 66835074
chr5 149045923 149045937 JUN JASPAR yes 70736710
chr5 149045932 149045947 ZIC3 JASPAR yes 66835075
chr5 149045932 149045947 ZIC4 JASPAR yes 66835076
chr5 149045932 149045947 ZIC3 JASPAR yes 70736711
chr5 149045932 149045947 ZIC4 JASPAR yes 70736712
chr5 149045933 149045947 GLIS3 JASPAR yes 66835077
chr5 149045933 149045947 ZIC1 JASPAR yes 66835078
chr5 149045933 149045947 GLIS3 JASPAR yes 70736713
chr5 149045933 149045947 ZIC1 JASPAR yes 70736714
chr5 149045940 149045950 SP1 JASPAR yes 66835079
chr5 149045940 149045950 SP1 JASPAR yes 70736715
chr5 149045947 149045957 SMAD3 JASPAR yes 66835080
chr5 149045947 149045957 SMAD3 JASPAR yes 70736716
chr5 149045964 149045975 E2F6 JASPAR yes 66835081
chr5 149045964 149045975 E2F6 JASPAR yes 70736717
chr5 149045972 149045987 TFAP2C JASPAR yes 66835082
chr5 149045972 149045987 TFAP2C JASPAR yes 70736718
chr5 149045974 149045977 MYB TRANSFAC yes 66835083
chr5 149045974 149045977 MYB TRANSFAC yes 70736719
chr5 149045977 149045986 TFAP2A JASPAR yes 66835084
chr5 149045977 149045986 TFAP2A JASPAR yes 70736720
chr5 149045993 149045997 H1TF2 TRANSFAC yes 66835085
chr5 149045993 149045997 NFE TRANSFAC yes 66835086
chr5 149045993 149045997 SRF TRANSFAC yes 66835087
chr5 149045993 149045997 H1TF2 TRANSFAC yes 70736721
chr5 149045993 149045997 NFE TRANSFAC yes 70736722
chr5 149045993 149045997 SRF TRANSFAC yes 70736723
chr5 149046015 149046018 MYB TRANSFAC yes 66835088
chr5 149046015 149046018 MYB TRANSFAC yes 70736724
chr5 149046018 149046032 PLAG1 JASPAR yes 66835089
chr5 149046018 149046032 PLAG1 JASPAR yes 70736725
SNP sites on vista49612[chr5:149045719-149046022]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 149045733 rs141982193 AC A
MYC
8609853
chr5 149045764 rs141216421 C T
ERF SPI1 SPIC
8609854
chr5 149045819 rs117842861 C G no 8609855
chr5 149045905 rs115136782 C T no 8609856
Genes possibly regulated by vista49612[chr5:149045719-149046022]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 149109861 149234585 + PPARGC1B ENSG00000155846.12 149109861 0.75 0.99 5868 36161
Expression level of Genes
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miRNAs possibly regulated by vista49612[chr5:149045719-149046022]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 149112430 149112451 + hsa-miR-378a-3p MIMAT0000732 149109872 0.000453316242789927 0.806181 0.0 1332
Expression level of miRNAs
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