EnhancerDB
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  3. vista49616[chr5:149111581-149111664]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49616[chr5:149111581-149111664]
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Tissue distribution of vista49616
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Transcription factor that possibly regulate vista49616[chr5:149111581-149111664]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 149109466 149111941 POLR2A UCSC Txn Factor no Conserved 108536932
chr5 149109466 149111941 POLR2A UCSC Txn Factor no Conserved 108536933
chr5 149109466 149111941 POLR2A UCSC Txn Factor no Conserved 108536934
chr5 149111230 149111708 PHF8 UCSC Txn Factor no Conserved 108536937
chr5 149111230 149111708 PHF8 UCSC Txn Factor no Conserved 108536938
chr5 149111479 149112135 E2F1 UCSC Txn Factor no Conserved 108536939
chr5 149111479 149112135 E2F1 UCSC Txn Factor no Conserved 108536940
chr5 149111597 149111608 NRF1 JASPAR yes 70736938
chr5 149111605 149111625 RREB1 JASPAR yes 70736939
chr5 149111607 149111627 RREB1 JASPAR yes 70736940
chr5 149111609 149111629 RREB1 JASPAR yes 70736941
chr5 149111611 149111631 RREB1 JASPAR yes 70736942
chr5 149111613 149111633 RREB1 JASPAR yes 70736943
chr5 149111615 149111635 RREB1 JASPAR yes 70736944
chr5 149111617 149111637 RREB1 JASPAR yes 70736945
chr5 149111619 149111639 RREB1 JASPAR yes 70736946
chr5 149111621 149111641 RREB1 JASPAR yes 70736947
chr5 149111637 149111651 MTF1 JASPAR yes 70736948
SNP sites on vista49616[chr5:149111581-149111664]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 149111608 rs71676300 GGTGTGT G
E2F1 NRF1 PHF8 POLR2A RREB1
8610410
chr5 149111608 rs869186543 GGTGTGT G
E2F1 NRF1 PHF8 POLR2A RREB1
8610411
Genes possibly regulated by vista49616[chr5:149111581-149111664]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 149109861 149234585 + PPARGC1B ENSG00000155846.12 149109861 0.75 0.99 5868 98280
Expression level of Genes
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miRNAs possibly regulated by vista49616[chr5:149111581-149111664]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results