EnhancerDB
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  3. vista49618[chr5:149162715-149163110]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49618[chr5:149162715-149163110]
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Tissue distribution of vista49618
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Transcription factor that possibly regulate vista49618[chr5:149162715-149163110]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 149162718 149162724 SP1 TRANSFAC yes 66844329
chr5 149162718 149162724 SP1 TRANSFAC yes 70737037
chr5 149162747 149162757 EN2 JASPAR yes 66844330
chr5 149162747 149162757 ESX1 JASPAR yes 66844331
chr5 149162747 149162757 GBX1 JASPAR yes 66844332
chr5 149162747 149162757 GBX2 JASPAR yes 66844333
chr5 149162747 149162757 HESX1 JASPAR yes 66844334
chr5 149162747 149162757 LBX2 JASPAR yes 66844335
chr5 149162747 149162757 LHX2 JASPAR yes 66844336
chr5 149162747 149162757 RAX JASPAR yes 66844337
chr5 149162747 149162757 EN2 JASPAR yes 70737038
chr5 149162747 149162757 ESX1 JASPAR yes 70737039
chr5 149162747 149162757 GBX1 JASPAR yes 70737040
chr5 149162747 149162757 GBX2 JASPAR yes 70737041
chr5 149162747 149162757 HESX1 JASPAR yes 70737042
chr5 149162747 149162757 LBX2 JASPAR yes 70737043
chr5 149162747 149162757 LHX2 JASPAR yes 70737044
chr5 149162747 149162757 RAX JASPAR yes 70737045
chr5 149162748 149162752 H1TF2 TRANSFAC yes 66844338
chr5 149162748 149162752 NFE TRANSFAC yes 66844339
chr5 149162748 149162752 SRF TRANSFAC yes 66844340
chr5 149162748 149162752 H1TF2 TRANSFAC yes 70737046
chr5 149162748 149162752 NFE TRANSFAC yes 70737047
chr5 149162748 149162752 SRF TRANSFAC yes 70737048
chr5 149162748 149162756 BARX1 JASPAR yes 66844341
chr5 149162748 149162756 BSX JASPAR yes 66844342
chr5 149162748 149162756 EN1 JASPAR yes 66844343
chr5 149162748 149162756 ISX JASPAR yes 66844344
chr5 149162748 149162756 LHX9 JASPAR yes 66844345
chr5 149162748 149162756 MSX1 JASPAR yes 66844346
chr5 149162748 149162756 MSX2 JASPAR yes 66844347
chr5 149162748 149162756 PRRX1 JASPAR yes 66844348
chr5 149162748 149162756 RAX2 JASPAR yes 66844349
chr5 149162748 149162756 SHOX JASPAR yes 66844350
chr5 149162748 149162756 BARX1 JASPAR yes 70737049
chr5 149162748 149162756 BSX JASPAR yes 70737050
chr5 149162748 149162756 EN1 JASPAR yes 70737051
chr5 149162748 149162756 ISX JASPAR yes 70737052
chr5 149162748 149162756 LHX9 JASPAR yes 70737053
chr5 149162748 149162756 MSX1 JASPAR yes 70737054
chr5 149162748 149162756 MSX2 JASPAR yes 70737055
chr5 149162748 149162756 PRRX1 JASPAR yes 70737056
chr5 149162748 149162756 RAX2 JASPAR yes 70737057
chr5 149162748 149162756 SHOX JASPAR yes 70737058
chr5 149162751 149162761 HMBOX1 JASPAR yes 66844351
chr5 149162751 149162761 HMBOX1 JASPAR yes 70737059
chr5 149162759 149162767 FEV JASPAR yes 66844352
chr5 149162759 149162767 FEV JASPAR yes 70737060
chr5 149162761 149162768 SPIB JASPAR yes 66844353
chr5 149162761 149162768 SPIB JASPAR yes 70737061
chr5 149162778 149162784 YY1 JASPAR yes 66844354
chr5 149162778 149162784 YY1 JASPAR yes 70737062
chr5 149162802 149162806 YY1 TRANSFAC yes 66844355
chr5 149162802 149162806 YY1 TRANSFAC yes 70737063
chr5 149162804 149162816 YY1 JASPAR yes 66844356
chr5 149162804 149162816 YY1 JASPAR yes 70737064
chr5 149162809 149162813 YY1 TRANSFAC yes 66844357
chr5 149162809 149162813 YY1 TRANSFAC yes 70737065
chr5 149162844 149162857 POU2F2 JASPAR yes 66844358
chr5 149162844 149162857 POU2F2 JASPAR yes 70737066
chr5 149162850 149162857 TBP TRANSFAC yes 66844359
chr5 149162850 149162857 TFIID TRANSFAC yes 66844360
chr5 149162850 149162857 TBP TRANSFAC yes 70737067
chr5 149162850 149162857 TFIID TRANSFAC yes 70737068
chr5 149162878 149162898 PPARG JASPAR yes 66844361
chr5 149162878 149162898 PPARG JASPAR yes 70737069
chr5 149162880 149162898 ESR2 JASPAR yes 66844362
chr5 149162880 149162898 ESR2 JASPAR yes 70737070
chr5 149162881 149162889 RHOXF1 JASPAR yes 66844363
chr5 149162881 149162889 RHOXF1 JASPAR yes 70737071
chr5 149162881 149162896 ESR2 JASPAR yes 66844364
chr5 149162881 149162896 ESR2 JASPAR yes 70737072
chr5 149162884 149162895 USF1 JASPAR yes 66844365
chr5 149162884 149162895 USF1 JASPAR yes 70737073
chr5 149162886 149162899 NR2F1 JASPAR yes 66844366
chr5 149162886 149162899 NR2F1 JASPAR yes 70737074
chr5 149162888 149162899 ESRRB JASPAR yes 66844367
chr5 149162888 149162899 ESRRB JASPAR yes 70737075
chr5 149162889 149162897 NR4A2 JASPAR yes 66844368
chr5 149162889 149162897 NR4A2 JASPAR yes 70737076
chr5 149162890 149162900 RORA JASPAR yes 66844369
chr5 149162890 149162900 RORA JASPAR yes 70737077
chr5 149162914 149162927 SMAD2 JASPAR yes 66844370
chr5 149162914 149162927 SMAD2 JASPAR yes 70737078
chr5 149162933 149162951 RARA JASPAR yes 66844371
chr5 149162933 149162951 RARA JASPAR yes 70737079
chr5 149162940 149162953 NR2F1 JASPAR yes 66844372
chr5 149162940 149162953 NR2F1 JASPAR yes 70737080
chr5 149162942 149162953 ESRRA JASPAR yes 66844373
chr5 149162942 149162953 ESRRB JASPAR yes 66844374
chr5 149162942 149162953 ESRRA JASPAR yes 70737081
chr5 149162942 149162953 ESRRB JASPAR yes 70737082
chr5 149162953 149162971 ESR1 JASPAR yes 66844375
chr5 149162953 149162971 ESR1 JASPAR yes 70737083
chr5 149162956 149162971 LEF1 JASPAR yes 66844376
chr5 149162956 149162971 LEF1 JASPAR yes 70737084
chr5 149162959 149162972 NR2F1 JASPAR yes 66844377
chr5 149162959 149162972 NR2F1 JASPAR yes 70737085
chr5 149162962 149162970 NR4A2 JASPAR yes 66844378
chr5 149162962 149162970 NR4A2 JASPAR yes 70737086
chr5 149162963 149162973 RORA JASPAR yes 66844379
chr5 149162963 149162973 RORA JASPAR yes 70737087
chr5 149162963 149162980 RARA JASPAR yes 66844380
chr5 149162963 149162980 RARA JASPAR yes 70737088
chr5 149162963 149162981 SRF JASPAR yes 66844381
chr5 149162963 149162981 SRF JASPAR yes 70737089
chr5 149162974 149162978 H4TF2 TRANSFAC yes 66844382
chr5 149162974 149162978 H4TF2 TRANSFAC yes 70737090
chr5 149162980 149162994 SPI1 JASPAR yes 66844383
chr5 149162980 149162994 SPI1 JASPAR yes 70737091
chr5 149163038 149163046 GATA3 JASPAR yes 66844384
chr5 149163038 149163046 GATA3 JASPAR yes 70737092
chr5 149163047 149163057 TBX21 JASPAR yes 66844385
chr5 149163047 149163057 TBX21 JASPAR yes 70737093
chr5 149163047 149163058 TBX2 JASPAR yes 66844386
chr5 149163047 149163058 TBX2 JASPAR yes 70737094
chr5 149163047 149163060 EOMES JASPAR yes 66844387
chr5 149163047 149163060 EOMES JASPAR yes 70737095
chr5 149163048 149163058 TBR1 JASPAR yes 66844388
chr5 149163048 149163058 TBR1 JASPAR yes 70737096
chr5 149163050 149163063 SMAD2 JASPAR yes 66844389
chr5 149163050 149163063 SMAD2 JASPAR yes 70737097
chr5 149163054 149163069 HNF4G JASPAR yes 66844390
chr5 149163054 149163069 HNF4G JASPAR yes 70737098
chr5 149163055 149163070 HNF4A JASPAR yes 66844391
chr5 149163055 149163070 HNF4A JASPAR yes 70737099
chr5 149163060 149163071 FOXH1 JASPAR yes 66844392
chr5 149163060 149163071 FOXH1 JASPAR yes 70737100
chr5 149163069 149163074 MYC TRANSFAC yes 66844393
chr5 149163069 149163074 MYC TRANSFAC yes 70737101
chr5 149163084 149163097 NFKB2 JASPAR yes 66844394
chr5 149163084 149163097 NFKB2 JASPAR yes 70737102
chr5 149163085 149163098 NFKB2 JASPAR yes 66844395
chr5 149163085 149163098 NFKB2 JASPAR yes 70737103
chr5 149163087 149163098 NFKB1 JASPAR yes 66844396
chr5 149163087 149163098 NFKB1 JASPAR yes 70737104
chr5 149163088 149163107 REST JASPAR yes 66844397
chr5 149163088 149163107 REST JASPAR yes 70737105
chr5 149163090 149163102 INSM1 JASPAR yes 66844398
chr5 149163090 149163102 INSM1 JASPAR yes 70737106
chr5 149163100 149163115 RFX5 JASPAR yes 66844399
chr5 149163100 149163115 RFX5 JASPAR yes 70737107
SNP sites on vista49618[chr5:149162715-149163110]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 149163034 rs192296324 G A no 8610899
Genes possibly regulated by vista49618[chr5:149162715-149163110]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 149109861 149234585 + PPARGC1B ENSG00000155846.12 149109861 0.75 0.99 5868 47146
Expression level of Genes
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miRNAs possibly regulated by vista49618[chr5:149162715-149163110]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results