EnhancerDB
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  3. vista49619[chr5:149172151-149172518]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49619[chr5:149172151-149172518]
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Tissue distribution of vista49619
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Transcription factor that possibly regulate vista49619[chr5:149172151-149172518]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 149172141 149172162 IRF1 JASPAR yes 66845484
chr5 149172141 149172162 IRF1 JASPAR yes 70737108
chr5 149172143 149172158 STAT2 JASPAR yes 66845485
chr5 149172143 149172158 STAT2 JASPAR yes 70737109
chr5 149172145 149172157 IRF1 JASPAR yes 66845486
chr5 149172145 149172157 IRF1 JASPAR yes 70737110
chr5 149172163 149172178 AR JASPAR yes 66845487
chr5 149172163 149172178 AR JASPAR yes 70737111
chr5 149172191 149172197 TCF4 TRANSFAC yes 66845488
chr5 149172191 149172197 TCF4 TRANSFAC yes 70737112
chr5 149172199 149172207 RHOXF1 JASPAR yes 66845489
chr5 149172199 149172207 RHOXF1 JASPAR yes 70737113
chr5 149172202 149172215 POU2F2 JASPAR yes 66845490
chr5 149172202 149172215 POU2F2 JASPAR yes 70737114
chr5 149172210 149172214 YY1 TRANSFAC yes 66845491
chr5 149172210 149172214 YY1 TRANSFAC yes 70737115
chr5 149172222 149172232 GSC2 JASPAR yes 66845492
chr5 149172222 149172232 GSC2 JASPAR yes 70737116
chr5 149172223 149172231 OTX2 JASPAR yes 66845493
chr5 149172223 149172231 OTX2 JASPAR yes 70737117
chr5 149172228 149172232 YY1 TRANSFAC yes 66845494
chr5 149172228 149172232 YY1 TRANSFAC yes 70737118
chr5 149172241 149172251 TEAD1 JASPAR yes 66845495
chr5 149172241 149172251 TEAD4 JASPAR yes 66845496
chr5 149172241 149172251 TEAD1 JASPAR yes 70737119
chr5 149172241 149172251 TEAD4 JASPAR yes 70737120
chr5 149172243 149172261 MAFF JASPAR yes 66845497
chr5 149172243 149172261 MAFF JASPAR yes 70737121
chr5 149172245 149172256 NRL JASPAR yes 66845498
chr5 149172245 149172256 NRL JASPAR yes 70737122
chr5 149172245 149172260 MAFK JASPAR yes 66845499
chr5 149172245 149172260 MAFK JASPAR yes 70737123
chr5 149172245 149172266 MAFG JASPAR yes 66845500
chr5 149172245 149172266 MAFG JASPAR yes 70737124
chr5 149172259 149172264 GATA2 JASPAR yes 66845501
chr5 149172259 149172264 GATA2 JASPAR yes 70737125
chr5 149172340 149172357 PAX9 JASPAR yes 66845502
chr5 149172340 149172357 PAX9 JASPAR yes 70737126
chr5 149172341 149172360 PAX5 JASPAR yes 66845503
chr5 149172341 149172360 PAX5 JASPAR yes 70737127
chr5 149172348 149172368 PPARG JASPAR yes 66845504
chr5 149172348 149172368 PPARG JASPAR yes 70737128
chr5 149172392 149172396 TEAD2 TRANSFAC yes 66845505
chr5 149172392 149172396 TEAD2 TRANSFAC yes 70737129
chr5 149172392 149172397 TBP TRANSFAC yes 66845506
chr5 149172392 149172397 TBP TRANSFAC yes 70737130
chr5 149172392 149172398 TMF TRANSFAC yes 66845507
chr5 149172392 149172398 TMF TRANSFAC yes 70737131
chr5 149172398 149172404 MZF1 JASPAR yes 66845508
chr5 149172398 149172404 MZF1 JASPAR yes 70737132
chr5 149172403 149172409 SOX10 JASPAR yes 66845509
chr5 149172403 149172409 SOX10 JASPAR yes 70737133
chr5 149172403 149172417 SPIC JASPAR yes 66845510
chr5 149172403 149172417 SPIC JASPAR yes 70737134
chr5 149172404 149172417 ELF1 JASPAR yes 66845511
chr5 149172404 149172417 ELF1 JASPAR yes 70737135
chr5 149172406 149172417 ETV2 JASPAR yes 66845512
chr5 149172406 149172417 ETV2 JASPAR yes 70737136
chr5 149172407 149172414 SPIB JASPAR yes 66845513
chr5 149172407 149172414 SPIB JASPAR yes 70737137
chr5 149172407 149172417 ETV6 JASPAR yes 66845514
chr5 149172407 149172417 ETV6 JASPAR yes 70737138
chr5 149172407 149172418 FLI1 JASPAR yes 66845515
chr5 149172407 149172418 FLI1 JASPAR yes 70737139
chr5 149172408 149172416 FEV JASPAR yes 66845516
chr5 149172408 149172416 FEV JASPAR yes 70737140
chr5 149172411 149172422 BATF JASPAR yes 66845517
chr5 149172411 149172422 BATF JASPAR yes 70737141
chr5 149172425 149172429 YY1 TRANSFAC yes 66845518
chr5 149172425 149172429 YY1 TRANSFAC yes 70737142
chr5 149172431 149172443 TEAD1 JASPAR yes 66845519
chr5 149172431 149172443 TEAD1 JASPAR yes 70737143
chr5 149172431 149172447 SOX8 JASPAR yes 66845520
chr5 149172431 149172447 SOX8 JASPAR yes 70737144
chr5 149172435 149172446 ELF5 JASPAR yes 66845521
chr5 149172435 149172446 ELF5 JASPAR yes 70737145
chr5 149172437 149172453 SRF JASPAR yes 66845522
chr5 149172437 149172453 SRF JASPAR yes 70737146
chr5 149172437 149172455 SRF JASPAR yes 66845523
chr5 149172437 149172455 SRF JASPAR yes 70737147
chr5 149172438 149172443 ETS2 TRANSFAC yes 66845524
chr5 149172438 149172443 ETS2 TRANSFAC yes 70737148
chr5 149172445 149172455 NFATC3 JASPAR yes 66845525
chr5 149172445 149172455 NFATC3 JASPAR yes 70737149
chr5 149172447 149172454 NFATC2 JASPAR yes 66845526
chr5 149172447 149172454 NFATC2 JASPAR yes 70737150
chr5 149172450 149172464 STAT1 JASPAR yes 66845527
chr5 149172450 149172464 STAT1 JASPAR yes 70737151
chr5 149172450 149172465 STAT2 JASPAR yes 66845528
chr5 149172450 149172465 STAT2 JASPAR yes 70737152
chr5 149172485 149172489 NFE TRANSFAC yes 66845529
chr5 149172485 149172489 NFE TRANSFAC yes 70737153
chr5 149172491 149172496 TFAP2A TRANSFAC yes 66845530
chr5 149172491 149172496 TFAP2A TRANSFAC yes 70737154
chr5 149172491 149172497 MZF1 JASPAR yes 66845531
chr5 149172491 149172497 MZF1 JASPAR yes 70737155
chr5 149172491 149172504 NFKB1 JASPAR yes 66845532
chr5 149172491 149172504 NFKB1 JASPAR yes 70737156
chr5 149172493 149172510 BCL6B JASPAR yes 66845533
chr5 149172493 149172510 BCL6B JASPAR yes 70737157
SNP sites on vista49619[chr5:149172151-149172518]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 149172157 rs567240281 T G
IRF1 STAT2
8610999
chr5 149172158 rs371883388 C G
IRF1 STAT2
8611000
chr5 149172165 rs28417138 A G
AR
8611001
chr5 149172167 rs72830241 C G
AR
8611002
chr5 149172170 rs114571227 T C
AR
8611003
chr5 149172257 rs13158830 G A
MAFF MAFG MAFK
8611004
chr5 149172290 rs146560378 T C no 8611005
chr5 149172323 rs10476746 T G no 8611006
chr5 149172327 rs538668913 T G no 8611007
chr5 149172331 rs79583823 T G no 8611008
chr5 149172460 rs189351702 A C
STAT1 STAT2
8611009
Genes possibly regulated by vista49619[chr5:149172151-149172518]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 149109861 149234585 + PPARGC1B ENSG00000155846.12 149109861 0.75 0.99 5868 37710
Expression level of Genes
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miRNAs possibly regulated by vista49619[chr5:149172151-149172518]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results