EnhancerDB
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  3. vista49620[chr5:149261958-149262272]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49620[chr5:149261958-149262272]
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Tissue distribution of vista49620
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Transcription factor that possibly regulate vista49620[chr5:149261958-149262272]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 149261942 149261961 RFX2 JASPAR yes 66853030
chr5 149261942 149261961 RFX2 JASPAR yes 70737158
chr5 149262002 149262011 HIC2 JASPAR yes 66853031
chr5 149262002 149262011 HIC2 JASPAR yes 70737159
chr5 149262036 149262040 YY1 TRANSFAC yes 66853032
chr5 149262036 149262040 YY1 TRANSFAC yes 70737160
chr5 149262050 149262063 POU2F2 JASPAR yes 66853033
chr5 149262050 149262063 POU2F2 JASPAR yes 70737161
chr5 149262052 149262070 SRF JASPAR yes 66853034
chr5 149262052 149262070 SRF JASPAR yes 70737162
chr5 149262056 149262063 TBP TRANSFAC yes 66853035
chr5 149262056 149262063 TFIID TRANSFAC yes 66853036
chr5 149262056 149262063 TBP TRANSFAC yes 70737163
chr5 149262056 149262063 TFIID TRANSFAC yes 70737164
chr5 149262080 149262100 TBX19 JASPAR yes 66853037
chr5 149262080 149262100 TBX19 JASPAR yes 70737165
chr5 149262083 149262093 SREBF1 JASPAR yes 66853038
chr5 149262083 149262093 SREBF2 JASPAR yes 66853039
chr5 149262083 149262093 SREBF1 JASPAR yes 70737166
chr5 149262083 149262093 SREBF2 JASPAR yes 70737167
chr5 149262099 149262113 JUN JASPAR yes 66853040
chr5 149262099 149262113 JUN JASPAR yes 70737168
chr5 149262102 149262118 ZNF143 JASPAR yes 66853041
chr5 149262102 149262118 ZNF143 JASPAR yes 70737169
chr5 149262103 149262114 FOS JASPAR yes 66853042
chr5 149262103 149262114 FOSL1 JASPAR yes 66853043
chr5 149262103 149262114 NFE2 JASPAR yes 66853044
chr5 149262103 149262114 FOS JASPAR yes 70737170
chr5 149262103 149262114 FOSL1 JASPAR yes 70737171
chr5 149262103 149262114 NFE2 JASPAR yes 70737172
chr5 149262105 149262111 JUN TRANSFAC yes 66853045
chr5 149262105 149262111 JUN TRANSFAC yes 70737173
chr5 149262122 149262143 IRF1 JASPAR yes 66853046
chr5 149262122 149262143 IRF1 JASPAR yes 70737174
chr5 149262125 149262139 IRF7 JASPAR yes 66853047
chr5 149262125 149262139 IRF7 JASPAR yes 70737175
chr5 149262127 149262139 IRF1 JASPAR yes 66853048
chr5 149262127 149262139 IRF1 JASPAR yes 70737176
chr5 149262171 149262175 YY1 TRANSFAC yes 66853049
chr5 149262171 149262175 YY1 TRANSFAC yes 70737177
chr5 149262179 149262197 TP73 JASPAR yes 66853050
chr5 149262179 149262197 TP73 JASPAR yes 70737178
chr5 149262180 149262200 TP53 JASPAR yes 66853051
chr5 149262180 149262200 TP53 JASPAR yes 70737179
chr5 149262218 149262221 MYB TRANSFAC yes 66853052
chr5 149262218 149262221 MYB TRANSFAC yes 70737180
chr5 149262221 149262225 H1TF2 TRANSFAC yes 66853053
chr5 149262221 149262225 NFE TRANSFAC yes 66853054
chr5 149262221 149262225 SRF TRANSFAC yes 66853055
chr5 149262221 149262225 H1TF2 TRANSFAC yes 70737181
chr5 149262221 149262225 NFE TRANSFAC yes 70737182
chr5 149262221 149262225 SRF TRANSFAC yes 70737183
chr5 149262223 149262231 HOXA5 JASPAR yes 66853056
chr5 149262223 149262231 HOXA5 JASPAR yes 70737184
chr5 149262241 149262258 ZNF410 JASPAR yes 66853057
chr5 149262241 149262258 ZNF410 JASPAR yes 70737185
chr5 149262251 149262256 GATA2 JASPAR yes 66853058
chr5 149262251 149262256 GATA2 JASPAR yes 70737186
chr5 149262262 149262270 FOXL1 JASPAR yes 66853059
chr5 149262262 149262270 FOXL1 JASPAR yes 70737187
chr5 149262268 149262273 ETS2 TRANSFAC yes 66853060
chr5 149262268 149262273 ETS2 TRANSFAC yes 70737188
SNP sites on vista49620[chr5:149261958-149262272]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 149262035 rs531300655 A G no 8611767
chr5 149262186 rs35570504 C A
TP53 TP73
8611768
Genes possibly regulated by vista49620[chr5:149261958-149262272]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 149237519 149324356 - PDE6A ENSG00000132915.6 149324356 0.86 0.87 5869 37916
chr5 149340300 149373018 + SLC26A2 ENSG00000155850.7 149340300 0.86 0.97 5870 21972
Expression level of Genes
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miRNAs possibly regulated by vista49620[chr5:149261958-149262272]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results