EnhancerDB
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  3. vista49635[chr5:149445526-149445798]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49635[chr5:149445526-149445798]
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Tissue distribution of vista49635
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Transcription factor that possibly regulate vista49635[chr5:149445526-149445798]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 149445583 149446077 POLR2A UCSC Txn Factor no Conserved 108536964
chr5 149445517 149445526 HIC2 JASPAR yes 66859087
chr5 149445517 149445526 HIC2 JASPAR yes 70737754
chr5 149445535 149445547 IRF1 JASPAR yes 66859089
chr5 149445535 149445547 IRF1 JASPAR yes 70737755
chr5 149445540 149445558 SRF JASPAR yes 66859090
chr5 149445540 149445558 SRF JASPAR yes 70737756
chr5 149445542 149445560 SRF JASPAR yes 66859091
chr5 149445542 149445560 SRF JASPAR yes 70737757
chr5 149445551 149445556 ETS2 TRANSFAC yes 66859092
chr5 149445551 149445556 ETS2 TRANSFAC yes 70737758
chr5 149445560 149445571 FOXA1 JASPAR yes 66859093
chr5 149445560 149445571 FOXA1 JASPAR yes 70737759
chr5 149445587 149445592 ETS2 TRANSFAC yes 66859094
chr5 149445587 149445592 ETS2 TRANSFAC yes 70737760
chr5 149445587 149445602 SCRT1 JASPAR yes 66859095
chr5 149445587 149445602 SCRT1 JASPAR yes 70737761
chr5 149445591 149445600 SNAI2 JASPAR yes 66859096
chr5 149445591 149445600 SNAI2 JASPAR yes 70737762
chr5 149445591 149445601 FIGLA JASPAR yes 66859097
chr5 149445591 149445601 MSC JASPAR yes 66859098
chr5 149445591 149445601 FIGLA JASPAR yes 70737763
chr5 149445591 149445601 MSC JASPAR yes 70737764
chr5 149445603 149445617 JUN JASPAR yes 66859099
chr5 149445603 149445617 JUN JASPAR yes 70737765
chr5 149445606 149445617 FOSL2 JASPAR yes 66859100
chr5 149445606 149445617 JUNB JASPAR yes 66859101
chr5 149445606 149445617 FOSL2 JASPAR yes 70737766
chr5 149445606 149445617 JUNB JASPAR yes 70737767
chr5 149445607 149445618 FOSL1 JASPAR yes 66859102
chr5 149445607 149445618 FOSL1 JASPAR yes 70737768
chr5 149445609 149445615 JUN TRANSFAC yes 66859103
chr5 149445609 149445615 JUN TRANSFAC yes 70737769
chr5 149445616 149445620 H4TF2 TRANSFAC yes 66859104
chr5 149445616 149445620 H4TF2 TRANSFAC yes 70737770
chr5 149445616 149445637 REST JASPAR yes 66859105
chr5 149445616 149445637 REST JASPAR yes 70737771
chr5 149445617 149445636 REST JASPAR yes 66859106
chr5 149445617 149445636 REST JASPAR yes 70737772
chr5 149445620 149445624 NFE TRANSFAC yes 66859107
chr5 149445620 149445624 NFE TRANSFAC yes 70737773
chr5 149445622 149445637 TFAP2C JASPAR yes 66859108
chr5 149445622 149445637 TFAP2C JASPAR yes 70737774
chr5 149445623 149445634 EBF1 JASPAR yes 66859109
chr5 149445623 149445634 EBF1 JASPAR yes 70737775
chr5 149445627 149445647 RREB1 JASPAR yes 66859110
chr5 149445627 149445647 RREB1 JASPAR yes 70737776
chr5 149445631 149445636 SP1 TRANSFAC yes 66859111
chr5 149445631 149445636 SP1 TRANSFAC yes 70737777
chr5 149445635 149445640 SP1 TRANSFAC yes 66859112
chr5 149445635 149445640 SP1 TRANSFAC yes 70737778
chr5 149445636 149445646 SP1 JASPAR yes 66859113
chr5 149445636 149445646 SP1 JASPAR yes 70737779
chr5 149445666 149445682 RFX4 JASPAR yes 66859114
chr5 149445666 149445682 RFX4 JASPAR yes 70737780
chr5 149445687 149445701 RXRB JASPAR yes 66859115
chr5 149445687 149445701 RXRG JASPAR yes 66859116
chr5 149445687 149445701 RXRB JASPAR yes 70737781
chr5 149445687 149445701 RXRG JASPAR yes 70737782
chr5 149445687 149445702 NR2C2 JASPAR yes 66859117
chr5 149445687 149445702 NR2C2 JASPAR yes 70737783
chr5 149445697 149445718 ZNF263 JASPAR yes 66859118
chr5 149445697 149445718 ZNF263 JASPAR yes 70737784
chr5 149445698 149445708 MZF1 JASPAR yes 66859119
chr5 149445698 149445708 MZF1 JASPAR yes 70737785
chr5 149445701 149445707 SP1 TRANSFAC yes 66859120
chr5 149445701 149445707 SP1 TRANSFAC yes 70737786
chr5 149445701 149445711 SP1 JASPAR yes 66859121
chr5 149445701 149445711 SP1 JASPAR yes 70737787
chr5 149445715 149445726 EBF1 JASPAR yes 66859122
chr5 149445715 149445726 EBF1 JASPAR yes 70737788
chr5 149445716 149445727 EBF1 JASPAR yes 66859123
chr5 149445716 149445727 EBF1 JASPAR yes 70737789
chr5 149445733 149445736 MYB TRANSFAC yes 66859124
chr5 149445733 149445736 MYB TRANSFAC yes 70737790
chr5 149445743 149445749 MZF1 JASPAR yes 66859125
chr5 149445743 149445749 MZF1 JASPAR yes 70737791
chr5 149445752 149445762 ETV6 JASPAR yes 66859126
chr5 149445752 149445762 ETV6 JASPAR yes 70737792
chr5 149445752 149445763 ELF5 JASPAR yes 66859127
chr5 149445752 149445763 ELF5 JASPAR yes 70737793
chr5 149445753 149445760 SPI1 JASPAR yes 66859128
chr5 149445753 149445760 SPI1 JASPAR yes 70737794
chr5 149445753 149445761 EHF JASPAR yes 66859129
chr5 149445753 149445761 EHF JASPAR yes 70737795
chr5 149445756 149445767 EBF1 JASPAR yes 66859130
chr5 149445756 149445767 EBF1 JASPAR yes 70737796
chr5 149445795 149445799 NFE TRANSFAC yes 66859131
chr5 149445795 149445799 NFE TRANSFAC yes 70737797
SNP sites on vista49635[chr5:149445526-149445798]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 149445595 rs216145 A G
FIGLA MSC POLR2A SCRT1 SNAI2
8612444
chr5 149445657 rs113355830 G A
POLR2A
8612445
chr5 149445688 rs146608931 C T
NR2C2 POLR2A RXRB RXRG
8612446
chr5 149445699 rs73275628 C T
MZF1 NR2C2 POLR2A RXRB RXRG ZNF263
8612447
chr5 149445711 rs139832248 C G
POLR2A SP1 ZNF263
8612448
chr5 149445759 rs554268945 C CTCCTGGGACAAGAG
EBF1 EHF ELF5 ETV6 POLR2A SPI1
8612449
Genes possibly regulated by vista49635[chr5:149445526-149445798]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 149372681 149380730 - TIGD6 ENSG00000164296.6 149380730 0.63 1.0 5871 35204
chr5 149379884 149432386 + HMGXB3 ENSG00000113716.8 149379884 0.64 1.0 5872 34358
chr5 149432854 149492935 - CSF1R ENSG00000182578.9 149492935 0.95 1.0 5873 52863
chr5 149493400 149535435 - PDGFRB ENSG00000113721.9 149535435 0.78 0.98 5874 10363
Expression level of Genes
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miRNAs possibly regulated by vista49635[chr5:149445526-149445798]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results