EnhancerDB
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  3. vista49640[chr5:149525289-149525473]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49640[chr5:149525289-149525473]
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Tissue distribution of vista49640
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Transcription factor that possibly regulate vista49640[chr5:149525289-149525473]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 149525288 149525303 FOXP1 JASPAR yes 66863516
chr5 149525288 149525303 FOXP1 JASPAR yes 70738033
chr5 149525290 149525300 HOXB13 JASPAR yes 66863517
chr5 149525290 149525300 HOXB13 JASPAR yes 70738034
chr5 149525290 149525305 FOXP1 JASPAR yes 66863518
chr5 149525290 149525305 FOXP1 JASPAR yes 70738035
chr5 149525294 149525300 TBP TRANSFAC yes 66863519
chr5 149525294 149525300 TBP TRANSFAC yes 70738036
chr5 149525294 149525309 FOXP1 JASPAR yes 66863520
chr5 149525294 149525309 FOXP1 JASPAR yes 70738037
chr5 149525294 149525315 IRF1 JASPAR yes 66863521
chr5 149525294 149525315 IRF1 JASPAR yes 70738038
chr5 149525296 149525308 FOXC2 JASPAR yes 66863522
chr5 149525296 149525308 FOXC2 JASPAR yes 70738039
chr5 149525297 149525311 IRF7 JASPAR yes 66863523
chr5 149525297 149525311 IRF7 JASPAR yes 70738040
chr5 149525298 149525313 PRDM1 JASPAR yes 66863524
chr5 149525298 149525313 STAT2 JASPAR yes 66863525
chr5 149525298 149525313 PRDM1 JASPAR yes 70738041
chr5 149525298 149525313 STAT2 JASPAR yes 70738042
chr5 149525299 149525311 IRF1 JASPAR yes 66863526
chr5 149525299 149525311 IRF1 JASPAR yes 70738043
chr5 149525306 149525317 PHOX2A JASPAR yes 66863527
chr5 149525306 149525317 PROP1 JASPAR yes 66863528
chr5 149525306 149525317 PHOX2A JASPAR yes 70738044
chr5 149525306 149525317 PROP1 JASPAR yes 70738045
chr5 149525309 149525319 ALX3 JASPAR yes 66863529
chr5 149525309 149525319 EMX1 JASPAR yes 66863530
chr5 149525309 149525319 EMX2 JASPAR yes 66863531
chr5 149525309 149525319 EN2 JASPAR yes 66863532
chr5 149525309 149525319 ESX1 JASPAR yes 66863533
chr5 149525309 149525319 EVX1 JASPAR yes 66863534
chr5 149525309 149525319 EVX2 JASPAR yes 66863535
chr5 149525309 149525319 GBX1 JASPAR yes 66863536
chr5 149525309 149525319 GBX2 JASPAR yes 66863537
chr5 149525309 149525319 GSX1 JASPAR yes 66863538
chr5 149525309 149525319 GSX2 JASPAR yes 66863539
chr5 149525309 149525319 HESX1 JASPAR yes 66863540
chr5 149525309 149525319 HOXA2 JASPAR yes 66863541
chr5 149525309 149525319 HOXB2 JASPAR yes 66863542
chr5 149525309 149525319 HOXB3 JASPAR yes 66863543
chr5 149525309 149525319 LBX2 JASPAR yes 66863544
chr5 149525309 149525319 LHX2 JASPAR yes 66863545
chr5 149525309 149525319 LHX6 JASPAR yes 66863546
chr5 149525309 149525319 MEOX1 JASPAR yes 66863547
chr5 149525309 149525319 MEOX2 JASPAR yes 66863548
chr5 149525309 149525319 MIXL1 JASPAR yes 66863549
chr5 149525309 149525319 MNX1 JASPAR yes 66863550
chr5 149525309 149525319 NOTO JASPAR yes 66863551
chr5 149525309 149525319 POU6F1 JASPAR yes 66863552
chr5 149525309 149525319 RAX JASPAR yes 66863553
chr5 149525309 149525319 ALX3 JASPAR yes 70738046
chr5 149525309 149525319 EMX1 JASPAR yes 70738047
chr5 149525309 149525319 EMX2 JASPAR yes 70738048
chr5 149525309 149525319 EN2 JASPAR yes 70738049
chr5 149525309 149525319 ESX1 JASPAR yes 70738050
chr5 149525309 149525319 EVX1 JASPAR yes 70738051
chr5 149525309 149525319 EVX2 JASPAR yes 70738052
chr5 149525309 149525319 GBX1 JASPAR yes 70738053
chr5 149525309 149525319 GBX2 JASPAR yes 70738054
chr5 149525309 149525319 GSX1 JASPAR yes 70738055
chr5 149525309 149525319 GSX2 JASPAR yes 70738056
chr5 149525309 149525319 HESX1 JASPAR yes 70738057
chr5 149525309 149525319 HOXA2 JASPAR yes 70738058
chr5 149525309 149525319 HOXB2 JASPAR yes 70738059
chr5 149525309 149525319 HOXB3 JASPAR yes 70738060
chr5 149525309 149525319 LBX2 JASPAR yes 70738061
chr5 149525309 149525319 LHX2 JASPAR yes 70738062
chr5 149525309 149525319 LHX6 JASPAR yes 70738063
chr5 149525309 149525319 MEOX1 JASPAR yes 70738064
chr5 149525309 149525319 MEOX2 JASPAR yes 70738065
chr5 149525309 149525319 MIXL1 JASPAR yes 70738066
chr5 149525309 149525319 MNX1 JASPAR yes 70738067
chr5 149525309 149525319 NOTO JASPAR yes 70738068
chr5 149525309 149525319 POU6F1 JASPAR yes 70738069
chr5 149525309 149525319 RAX JASPAR yes 70738070
chr5 149525310 149525318 BSX JASPAR yes 66863554
chr5 149525310 149525318 DLX6 JASPAR yes 66863555
chr5 149525310 149525318 EN1 JASPAR yes 66863556
chr5 149525310 149525318 ISX JASPAR yes 66863557
chr5 149525310 149525318 LBX1 JASPAR yes 66863558
chr5 149525310 149525318 LHX9 JASPAR yes 66863559
chr5 149525310 149525318 LMX1A JASPAR yes 66863560
chr5 149525310 149525318 LMX1B JASPAR yes 66863561
chr5 149525310 149525318 NKX6-1 JASPAR yes 66863562
chr5 149525310 149525318 NKX6-2 JASPAR yes 66863563
chr5 149525310 149525318 PAX4 JASPAR yes 66863564
chr5 149525310 149525318 PDX1 JASPAR yes 66863565
chr5 149525310 149525318 PRRX1 JASPAR yes 66863566
chr5 149525310 149525318 RAX2 JASPAR yes 66863567
chr5 149525310 149525318 SHOX JASPAR yes 66863568
chr5 149525310 149525318 UNCX JASPAR yes 66863569
chr5 149525310 149525318 VAX1 JASPAR yes 66863570
chr5 149525310 149525318 VAX2 JASPAR yes 66863571
chr5 149525310 149525318 VSX1 JASPAR yes 66863572
chr5 149525310 149525318 VSX2 JASPAR yes 66863573
chr5 149525310 149525318 BSX JASPAR yes 70738071
chr5 149525310 149525318 DLX6 JASPAR yes 70738072
chr5 149525310 149525318 EN1 JASPAR yes 70738073
chr5 149525310 149525318 ISX JASPAR yes 70738074
chr5 149525310 149525318 LBX1 JASPAR yes 70738075
chr5 149525310 149525318 LHX9 JASPAR yes 70738076
chr5 149525310 149525318 LMX1A JASPAR yes 70738077
chr5 149525310 149525318 LMX1B JASPAR yes 70738078
chr5 149525310 149525318 NKX6-1 JASPAR yes 70738079
chr5 149525310 149525318 NKX6-2 JASPAR yes 70738080
chr5 149525310 149525318 PAX4 JASPAR yes 70738081
chr5 149525310 149525318 PDX1 JASPAR yes 70738082
chr5 149525310 149525318 PRRX1 JASPAR yes 70738083
chr5 149525310 149525318 RAX2 JASPAR yes 70738084
chr5 149525310 149525318 SHOX JASPAR yes 70738085
chr5 149525310 149525318 UNCX JASPAR yes 70738086
chr5 149525310 149525318 VAX1 JASPAR yes 70738087
chr5 149525310 149525318 VAX2 JASPAR yes 70738088
chr5 149525310 149525318 VSX1 JASPAR yes 70738089
chr5 149525310 149525318 VSX2 JASPAR yes 70738090
chr5 149525310 149525320 POU6F2 JASPAR yes 66863574
chr5 149525310 149525320 POU6F2 JASPAR yes 70738091
chr5 149525310 149525329 PAX5 JASPAR yes 66863575
chr5 149525310 149525329 PAX5 JASPAR yes 70738092
chr5 149525328 149525339 E2F6 JASPAR yes 66863576
chr5 149525328 149525339 E2F6 JASPAR yes 70738093
chr5 149525356 149525377 MAFG JASPAR yes 66863577
chr5 149525356 149525377 MAFG JASPAR yes 70738094
chr5 149525357 149525371 JUN JASPAR yes 66863578
chr5 149525357 149525371 JUN JASPAR yes 70738095
chr5 149525359 149525370 BATF JASPAR yes 66863579
chr5 149525359 149525370 BATF JASPAR yes 70738096
chr5 149525360 149525371 FOSL2 JASPAR yes 66863580
chr5 149525360 149525371 JUNB JASPAR yes 66863581
chr5 149525360 149525371 NFE2L2 JASPAR yes 66863582
chr5 149525360 149525371 FOSL2 JASPAR yes 70738097
chr5 149525360 149525371 JUNB JASPAR yes 70738098
chr5 149525360 149525371 NFE2L2 JASPAR yes 70738099
chr5 149525361 149525372 FOS JASPAR yes 66863583
chr5 149525361 149525372 FOSL1 JASPAR yes 66863584
chr5 149525361 149525372 JUND JASPAR yes 66863585
chr5 149525361 149525372 FOS JASPAR yes 70738100
chr5 149525361 149525372 FOSL1 JASPAR yes 70738101
chr5 149525361 149525372 JUND JASPAR yes 70738102
chr5 149525363 149525370 JUN TRANSFAC yes 66863586
chr5 149525363 149525370 JUN TRANSFAC yes 70738103
chr5 149525414 149525418 LFA1 TRANSFAC yes 66863587
chr5 149525414 149525418 LFA1 TRANSFAC yes 70738104
chr5 149525416 149525437 IRF1 JASPAR yes 66863588
chr5 149525416 149525437 IRF1 JASPAR yes 70738105
chr5 149525418 149525433 IRF9 JASPAR yes 66863589
chr5 149525418 149525433 IRF9 JASPAR yes 70738106
chr5 149525441 149525455 ONECUT3 JASPAR yes 66863590
chr5 149525441 149525455 ONECUT3 JASPAR yes 70738107
chr5 149525443 149525454 PROP1 JASPAR yes 66863591
chr5 149525443 149525454 PROP1 JASPAR yes 70738108
chr5 149525449 149525464 HNF1A JASPAR yes 66863592
chr5 149525449 149525464 HNF1A JASPAR yes 70738109
chr5 149525452 149525458 TBP TRANSFAC yes 66863593
chr5 149525452 149525458 TBP TRANSFAC yes 70738110
chr5 149525467 149525481 GATA2 JASPAR yes 66863594
chr5 149525467 149525481 GATA2 JASPAR yes 70738111
chr5 149525471 149525479 GATA3 JASPAR yes 66863595
chr5 149525471 149525479 GATA5 JASPAR yes 66863596
chr5 149525471 149525479 GATA3 JASPAR yes 70738112
chr5 149525471 149525479 GATA5 JASPAR yes 70738113
SNP sites on vista49640[chr5:149525289-149525473]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 149525324 rs566021673 C T
PAX5
8612911
chr5 149525421 rs573563860 C A
IRF1 IRF9
8612912
Genes possibly regulated by vista49640[chr5:149525289-149525473]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 149432854 149492935 - CSF1R ENSG00000182578.9 149492935 0.95 1.0 5873 67646
chr5 149493400 149535435 - PDGFRB ENSG00000113721.9 149535435 0.78 0.98 5874 90038
chr5 149546358 149564120 + CDX1 ENSG00000113722.12 149546358 1.0 1.0 5875 79115
chr5 149569520 149602351 + SLC6A7 ENSG00000011083.4 149569520 0.99 0.99 5876 55953
Expression level of Genes
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miRNAs possibly regulated by vista49640[chr5:149525289-149525473]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results