EnhancerDB
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  3. vista49647[chr5:149668238-149668366]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49647[chr5:149668238-149668366]
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Tissue distribution of vista49647
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Transcription factor that possibly regulate vista49647[chr5:149668238-149668366]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 149668255 149668269 RXRB JASPAR yes 66870033
chr5 149668255 149668269 RXRG JASPAR yes 66870034
chr5 149668255 149668269 RXRB JASPAR yes 70738322
chr5 149668255 149668269 RXRG JASPAR yes 70738323
chr5 149668255 149668270 NR2C2 JASPAR yes 66870035
chr5 149668255 149668270 NR2C2 JASPAR yes 70738324
chr5 149668258 149668271 NR2F1 JASPAR yes 66870036
chr5 149668258 149668271 NR2F1 JASPAR yes 70738325
chr5 149668268 149668284 ZNF143 JASPAR yes 66870037
chr5 149668268 149668284 ZNF143 JASPAR yes 70738326
chr5 149668273 149668288 HSF1 JASPAR yes 66870038
chr5 149668273 149668288 HSF1 JASPAR yes 70738327
chr5 149668287 149668299 NHLH1 JASPAR yes 66870039
chr5 149668287 149668299 NHLH1 JASPAR yes 70738328
chr5 149668294 149668299 TFAP2A TRANSFAC yes 66870040
chr5 149668294 149668299 TFAP2A TRANSFAC yes 70738329
chr5 149668294 149668300 MZF1 JASPAR yes 66870041
chr5 149668294 149668300 MZF1 JASPAR yes 70738330
chr5 149668312 149668333 ZNF263 JASPAR yes 66870042
chr5 149668312 149668333 ZNF263 JASPAR yes 70738331
chr5 149668326 149668340 ZIC1 JASPAR yes 66870043
chr5 149668326 149668340 ZIC1 JASPAR yes 70738332
chr5 149668326 149668341 ZIC3 JASPAR yes 66870044
chr5 149668326 149668341 ZIC4 JASPAR yes 66870045
chr5 149668326 149668341 ZIC3 JASPAR yes 70738333
chr5 149668326 149668341 ZIC4 JASPAR yes 70738334
chr5 149668338 149668352 GLIS2 JASPAR yes 66870046
chr5 149668338 149668352 GLIS3 JASPAR yes 66870047
chr5 149668338 149668352 GLIS2 JASPAR yes 70738335
chr5 149668338 149668352 GLIS3 JASPAR yes 70738336
chr5 149668349 149668360 NFKB1 JASPAR yes 66870048
chr5 149668349 149668360 NFKB1 JASPAR yes 70738337
chr5 149668352 149668373 ZNF263 JASPAR yes 66870049
chr5 149668352 149668373 ZNF263 JASPAR yes 70738338
chr5 149668355 149668376 ZNF263 JASPAR yes 66870050
chr5 149668355 149668376 ZNF263 JASPAR yes 70738339
chr5 149668363 149668384 ZNF263 JASPAR yes 66870051
chr5 149668363 149668384 ZNF263 JASPAR yes 70738340
chr5 149668366 149668387 ZNF263 JASPAR yes 66870052
chr5 149668366 149668387 ZNF263 JASPAR yes 70738341
SNP sites on vista49647[chr5:149668238-149668366]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 149668241 rs76884529 C A,T no 8613729
chr5 149668269 rs142895937 A C,G
NR2C2 NR2F1 RXRB RXRG ZNF143
8613730
Genes possibly regulated by vista49647[chr5:149668238-149668366]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 149569520 149602351 + SLC6A7 ENSG00000011083.4 149569520 0.99 0.99 5876 1282
chr5 149599054 149669854 - CAMK2A ENSG00000070808.11 149669854 0.88 0.97 5877 98512
chr5 149675906 149718870 - ARSI ENSG00000183876.8 149718870 0.87 0.91 5878 49496
chr5 149737202 149779871 + TCOF1 ENSG00000070814.13 149737202 0.72 1.0 5879 31164
Expression level of Genes
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miRNAs possibly regulated by vista49647[chr5:149668238-149668366]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results