EnhancerDB
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  3. vista49648[chr5:149680761-149680933]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49648[chr5:149680761-149680933]
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Tissue distribution of vista49648
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Transcription factor that possibly regulate vista49648[chr5:149680761-149680933]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 149680758 149680762 YY1 TRANSFAC yes 66871423
chr5 149680758 149680762 YY1 TRANSFAC yes 70738342
chr5 149680758 149680766 HOXA5 JASPAR yes 66871424
chr5 149680758 149680766 HOXA5 JASPAR yes 70738343
chr5 149680832 149680838 NFIC JASPAR yes 66871425
chr5 149680832 149680838 NFIC JASPAR yes 70738344
chr5 149680849 149680858 NKX3-2 JASPAR yes 66871426
chr5 149680849 149680858 NKX3-2 JASPAR yes 70738345
chr5 149680866 149680887 ZNF263 JASPAR yes 66871427
chr5 149680866 149680887 ZNF263 JASPAR yes 70738346
chr5 149680877 149680887 SP1 JASPAR yes 66871428
chr5 149680877 149680887 SP1 JASPAR yes 70738347
chr5 149680902 149680910 OTX1 JASPAR yes 66871429
chr5 149680902 149680910 OTX2 JASPAR yes 66871430
chr5 149680902 149680910 OTX1 JASPAR yes 70738348
chr5 149680902 149680910 OTX2 JASPAR yes 70738349
SNP sites on vista49648[chr5:149680761-149680933]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 149680786 rs542205096 G A no 8613840
chr5 149680809 rs10463232 T A no 8613841
Genes possibly regulated by vista49648[chr5:149680761-149680933]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 149599054 149669854 - CAMK2A ENSG00000070808.11 149669854 0.88 0.97 5877 89093
chr5 149675906 149718870 - ARSI ENSG00000183876.8 149718870 0.87 0.91 5878 62063
chr5 149737202 149779871 + TCOF1 ENSG00000070814.13 149737202 0.72 1.0 5879 43731
Expression level of Genes
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miRNAs possibly regulated by vista49648[chr5:149680761-149680933]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results