EnhancerDB
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  3. vista49650[chr5:149708719-149708969]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49650[chr5:149708719-149708969]
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Tissue distribution of vista49650
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Transcription factor that possibly regulate vista49650[chr5:149708719-149708969]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 149708733 149708749 RFX2 JASPAR yes 70738407
chr5 149708733 149708749 RFX3 JASPAR yes 70738408
chr5 149708733 149708749 RFX4 JASPAR yes 70738409
chr5 149708733 149708749 RFX5 JASPAR yes 70738410
chr5 149708734 149708753 RFX2 JASPAR yes 70738411
chr5 149708747 149708757 MSC JASPAR yes 70738412
chr5 149708757 149708762 GATA2 JASPAR yes 70738413
chr5 149708759 149708770 EBF1 JASPAR yes 70738414
chr5 149708786 149708803 NR3C2 JASPAR yes 70738415
chr5 149708796 149708804 GATA5 JASPAR yes 70738416
chr5 149708803 149708806 MYB TRANSFAC yes 70738417
chr5 149708805 149708816 FLI1 JASPAR yes 70738418
chr5 149708805 149708818 ELF3 JASPAR yes 70738419
chr5 149708806 149708810 YY1 TRANSFAC yes 70738420
chr5 149708806 149708816 ERF JASPAR yes 70738421
chr5 149708806 149708816 ERG JASPAR yes 70738422
chr5 149708806 149708816 ETS1 JASPAR yes 70738423
chr5 149708806 149708816 FEV JASPAR yes 70738424
chr5 149708806 149708816 FLI1 JASPAR yes 70738425
chr5 149708806 149708817 ELF5 JASPAR yes 70738426
chr5 149708806 149708817 ETV2 JASPAR yes 70738427
chr5 149708806 149708818 EHF JASPAR yes 70738428
chr5 149708806 149708818 ELF1 JASPAR yes 70738429
chr5 149708806 149708818 ELF4 JASPAR yes 70738430
chr5 149708806 149708819 ELF1 JASPAR yes 70738431
chr5 149708806 149708820 SPIC JASPAR yes 70738432
chr5 149708807 149708815 FEV JASPAR yes 70738433
chr5 149708833 149708837 YY1 TRANSFAC yes 70738434
chr5 149708854 149708868 STAT1 JASPAR yes 70738435
chr5 149708880 149708890 SP1 JASPAR yes 70738436
chr5 149708889 149708903 RORA JASPAR yes 70738437
chr5 149708897 149708901 NFE TRANSFAC yes 70738438
chr5 149708906 149708912 MZF1 JASPAR yes 70738439
chr5 149708912 149708918 LEF1 TRANSFAC yes 70738440
chr5 149708912 149708918 SOX10 JASPAR yes 70738441
chr5 149708929 149708943 ONECUT3 JASPAR yes 70738442
chr5 149708938 149708952 POU4F1 JASPAR yes 70738443
chr5 149708938 149708954 POU4F2 JASPAR yes 70738444
chr5 149708938 149708954 POU4F3 JASPAR yes 70738445
chr5 149708943 149708947 YY1 TRANSFAC yes 70738446
chr5 149708949 149708963 POU4F1 JASPAR yes 70738447
chr5 149708952 149708964 PBX1 JASPAR yes 70738448
chr5 149708952 149708967 HNF1A JASPAR yes 70738449
chr5 149708953 149708967 POU4F1 JASPAR yes 70738450
chr5 149708960 149708965 MYB TRANSFAC yes 70738451
SNP sites on vista49650[chr5:149708719-149708969]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 149708844 rs555851653 G C no 8614119
chr5 149708845 rs574396988 C T no 8614120
Genes possibly regulated by vista49650[chr5:149708719-149708969]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 149599054 149669854 - CAMK2A ENSG00000070808.11 149669854 0.88 0.97 5877 61135
chr5 149675906 149718870 - ARSI ENSG00000183876.8 149718870 0.87 0.91 5878 90099
chr5 149737202 149779871 + TCOF1 ENSG00000070814.13 149737202 0.72 1.0 5879 71767
chr5 149781200 149792492 - CD74 ENSG00000019582.10 149792492 0.87 0.94 5880 16477
Expression level of Genes
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miRNAs possibly regulated by vista49650[chr5:149708719-149708969]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results