EnhancerDB
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  3. vista49657[chr5:149853688-149853975]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49657[chr5:149853688-149853975]
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Tissue distribution of vista49657
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Transcription factor that possibly regulate vista49657[chr5:149853688-149853975]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 149853563 149854063 ESR1 UCSC Txn Factor no Conserved 108536989
chr5 149853703 149854122 EP300 UCSC Txn Factor no Conserved 108536990
chr5 149853698 149853704 SOX10 JASPAR yes 66882656
chr5 149853698 149853704 SOX10 JASPAR yes 70738731
chr5 149853717 149853722 GATA2 JASPAR yes 66882657
chr5 149853717 149853722 GATA2 JASPAR yes 70738732
chr5 149853723 149853744 ZNF263 JASPAR yes 66882658
chr5 149853723 149853744 ZNF263 JASPAR yes 70738733
chr5 149853738 149853749 E2F6 JASPAR yes 66882659
chr5 149853738 149853749 E2F6 JASPAR yes 70738734
chr5 149853741 149853756 ZIC4 JASPAR yes 66882660
chr5 149853741 149853756 ZIC4 JASPAR yes 70738735
chr5 149853743 149853754 GCM1 JASPAR yes 66882661
chr5 149853743 149853754 GCM1 JASPAR yes 70738736
chr5 149853765 149853775 SREBF1 JASPAR yes 66882662
chr5 149853765 149853775 SREBF2 JASPAR yes 66882663
chr5 149853765 149853775 SREBF1 JASPAR yes 70738737
chr5 149853765 149853775 SREBF2 JASPAR yes 70738738
chr5 149853814 149853828 GATA2 JASPAR yes 66882664
chr5 149853814 149853828 GATA2 JASPAR yes 70738739
chr5 149853816 149853822 GATA1 TRANSFAC yes 66882665
chr5 149853816 149853822 GATA1 TRANSFAC yes 70738740
chr5 149853816 149853824 GATA5 JASPAR yes 66882666
chr5 149853816 149853824 GATA5 JASPAR yes 70738741
chr5 149853817 149853829 TEAD1 JASPAR yes 66882667
chr5 149853817 149853829 TEAD1 JASPAR yes 70738742
chr5 149853821 149853839 TP53 JASPAR yes 66882668
chr5 149853821 149853839 TP53 JASPAR yes 70738743
chr5 149853837 149853857 PPARG JASPAR yes 66882669
chr5 149853837 149853857 PPARG JASPAR yes 70738744
chr5 149853877 149853881 H4TF2 TRANSFAC yes 66882670
chr5 149853877 149853881 H4TF2 TRANSFAC yes 70738745
chr5 149853900 149853904 ESR1 TRANSFAC yes 66882671
chr5 149853900 149853904 ESR1 TRANSFAC yes 70738746
chr5 149853909 149853924 NR2C2 JASPAR yes 66882672
chr5 149853909 149853924 NR2C2 JASPAR yes 70738747
chr5 149853914 149853933 CTCF JASPAR yes 66882673
chr5 149853914 149853933 CTCF JASPAR yes 70738748
chr5 149853917 149853931 ZIC1 JASPAR yes 66882674
chr5 149853917 149853931 ZIC1 JASPAR yes 70738749
chr5 149853917 149853932 ZIC3 JASPAR yes 66882675
chr5 149853917 149853932 ZIC4 JASPAR yes 66882676
chr5 149853917 149853932 ZIC3 JASPAR yes 70738750
chr5 149853917 149853932 ZIC4 JASPAR yes 70738751
chr5 149853930 149853938 FOXL1 JASPAR yes 66882677
chr5 149853930 149853938 FOXL1 JASPAR yes 70738752
chr5 149853930 149853941 FOXB1 JASPAR yes 66882678
chr5 149853930 149853941 FOXB1 JASPAR yes 70738753
chr5 149853936 149853940 TEAD2 TRANSFAC yes 66882679
chr5 149853936 149853940 TEAD2 TRANSFAC yes 70738754
SNP sites on vista49657[chr5:149853688-149853975]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 149853746 rs528966186 AC A
E2F6 EP300 ESR1 GCM1 ZIC4
8615011
chr5 149853750 rs548053054 G A
EP300 ESR1 GCM1 ZIC4
8615012
chr5 149853768 rs73272620 C T
EP300 ESR1 SREBF1 SREBF2
8615013
chr5 149853825 rs192914085 A G
EP300 ESR1 GATA2 TEAD1 TP53
8615014
chr5 149853930 rs79023213 G A
CTCF EP300 ESR1 FOXB1 FOXL1 ZIC1 ZIC3 ZIC4
8615015
Genes possibly regulated by vista49657[chr5:149853688-149853975]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 149781200 149792492 - CD74 ENSG00000019582.10 149792492 0.87 0.94 5880 38804
chr5 149822753 149829319 - RPS14 ENSG00000164587.7 149829319 0.72 1.0 5881 75631
chr5 149865381 149937773 + NDST1 ENSG00000070614.10 149865381 0.65 1.0 5882 88594
Expression level of Genes
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miRNAs possibly regulated by vista49657[chr5:149853688-149853975]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results