EnhancerDB
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  3. vista49659[chr5:149902198-149902484]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49659[chr5:149902198-149902484]
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Tissue distribution of vista49659
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Transcription factor that possibly regulate vista49659[chr5:149902198-149902484]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 149901950 149902490 EP300 UCSC Txn Factor no Conserved 108536994
chr5 149902001 149902428 NFIC UCSC Txn Factor no Conserved 108536995
chr5 149902003 149902321 TEAD4 UCSC Txn Factor no Conserved 108536996
chr5 149902005 149902365 MYBL2 UCSC Txn Factor no Conserved 108536997
chr5 149902013 149902410 FOXA1 UCSC Txn Factor no Conserved 108536998
chr5 149902021 149902424 FOXA2 UCSC Txn Factor no Conserved 108536999
chr5 149902033 149902329 HNF4A UCSC Txn Factor no Conserved 108537000
chr5 149902046 149902371 SP1 UCSC Txn Factor no Conserved 108537001
chr5 149902194 149902209 HNF4G JASPAR yes 66887148
chr5 149902194 149902209 HNF4G JASPAR yes 70738850
chr5 149902195 149902210 HNF4A JASPAR yes 66887149
chr5 149902195 149902210 HNF4A JASPAR yes 70738851
chr5 149902199 149902205 SOX10 JASPAR yes 66887150
chr5 149902199 149902205 SOX10 JASPAR yes 70738852
chr5 149902205 149902224 RFX2 JASPAR yes 66887151
chr5 149902205 149902224 RFX2 JASPAR yes 70738853
chr5 149902210 149902218 MEIS2 JASPAR yes 66887152
chr5 149902210 149902218 MEIS3 JASPAR yes 66887153
chr5 149902210 149902218 MEIS2 JASPAR yes 70738854
chr5 149902210 149902218 MEIS3 JASPAR yes 70738855
chr5 149902211 149902215 NFE TRANSFAC yes 66887154
chr5 149902211 149902215 NFE TRANSFAC yes 70738856
chr5 149902226 149902230 YY1 TRANSFAC yes 66887155
chr5 149902226 149902230 YY1 TRANSFAC yes 70738857
chr5 149902235 149902255 RREB1 JASPAR yes 66887156
chr5 149902235 149902255 RREB1 JASPAR yes 70738858
chr5 149902247 149902252 SP1 TRANSFAC yes 66887157
chr5 149902247 149902252 SP1 TRANSFAC yes 70738859
chr5 149902250 149902263 SMAD2 JASPAR yes 66887158
chr5 149902250 149902263 SMAD2 JASPAR yes 70738860
chr5 149902252 149902260 MEIS3 JASPAR yes 66887159
chr5 149902252 149902260 MEIS3 JASPAR yes 70738861
chr5 149902257 149902271 MTF1 JASPAR yes 66887160
chr5 149902257 149902271 MTF1 JASPAR yes 70738862
chr5 149902262 149902273 FOXA1 JASPAR yes 66887161
chr5 149902262 149902273 FOXA1 JASPAR yes 70738863
chr5 149902262 149902277 FOXA1 JASPAR yes 66887162
chr5 149902262 149902277 FOXA1 JASPAR yes 70738864
chr5 149902263 149902275 FOXC2 JASPAR yes 66887163
chr5 149902263 149902275 FOXC2 JASPAR yes 70738865
chr5 149902265 149902280 FOXP1 JASPAR yes 66887164
chr5 149902265 149902280 FOXP1 JASPAR yes 70738866
chr5 149902268 149902279 FOXP2 JASPAR yes 66887165
chr5 149902268 149902279 FOXP2 JASPAR yes 70738867
chr5 149902268 149902280 FOXI1 JASPAR yes 66887166
chr5 149902268 149902280 FOXI1 JASPAR yes 70738868
chr5 149902270 149902278 FOXG1 JASPAR yes 66887167
chr5 149902270 149902278 FOXG1 JASPAR yes 70738869
chr5 149902272 149902278 HiNF-A TRANSFAC yes 66887168
chr5 149902272 149902278 HiNF-A TRANSFAC yes 70738870
chr5 149902274 149902294 TP63 JASPAR yes 66887169
chr5 149902274 149902294 TP63 JASPAR yes 70738871
chr5 149902284 149902288 LFA1 TRANSFAC yes 66887170
chr5 149902284 149902288 LFA1 TRANSFAC yes 70738872
chr5 149902284 149902296 PKNOX2 JASPAR yes 66887171
chr5 149902284 149902296 PKNOX2 JASPAR yes 70738873
chr5 149902285 149902294 SNAI2 JASPAR yes 66887172
chr5 149902285 149902294 SNAI2 JASPAR yes 70738874
chr5 149902285 149902295 ID4 JASPAR yes 66887173
chr5 149902285 149902295 NHLH1 JASPAR yes 66887174
chr5 149902285 149902295 TCF3 JASPAR yes 66887175
chr5 149902285 149902295 TCF4 JASPAR yes 66887176
chr5 149902285 149902295 ID4 JASPAR yes 70738875
chr5 149902285 149902295 NHLH1 JASPAR yes 70738876
chr5 149902285 149902295 TCF3 JASPAR yes 70738877
chr5 149902285 149902295 TCF4 JASPAR yes 70738878
chr5 149902287 149902296 ZEB1 JASPAR yes 66887177
chr5 149902287 149902296 ZEB1 JASPAR yes 70738879
chr5 149902287 149902297 TBX21 JASPAR yes 66887178
chr5 149902287 149902297 TBX21 JASPAR yes 70738880
chr5 149902287 149902298 TBX2 JASPAR yes 66887179
chr5 149902287 149902298 TBX2 JASPAR yes 70738881
chr5 149902287 149902300 EOMES JASPAR yes 66887180
chr5 149902287 149902300 EOMES JASPAR yes 70738882
chr5 149902288 149902296 MGA JASPAR yes 66887181
chr5 149902288 149902296 TBX15 JASPAR yes 66887182
chr5 149902288 149902296 TBX1 JASPAR yes 66887183
chr5 149902288 149902296 TBX4 JASPAR yes 66887184
chr5 149902288 149902296 TBX5 JASPAR yes 66887185
chr5 149902288 149902296 MGA JASPAR yes 70738883
chr5 149902288 149902296 TBX15 JASPAR yes 70738884
chr5 149902288 149902296 TBX1 JASPAR yes 70738885
chr5 149902288 149902296 TBX4 JASPAR yes 70738886
chr5 149902288 149902296 TBX5 JASPAR yes 70738887
chr5 149902288 149902298 TBR1 JASPAR yes 66887186
chr5 149902288 149902298 TBR1 JASPAR yes 70738888
chr5 149902297 149902318 IRF1 JASPAR yes 66887187
chr5 149902297 149902318 IRF1 JASPAR yes 70738889
chr5 149902301 149902316 STAT2 JASPAR yes 66887188
chr5 149902301 149902316 STAT2 JASPAR yes 70738890
chr5 149902311 149902317 SOX10 JASPAR yes 66887189
chr5 149902311 149902317 SOX10 JASPAR yes 70738891
chr5 149902314 149902329 PRDM1 JASPAR yes 66887190
chr5 149902314 149902329 PRDM1 JASPAR yes 70738892
chr5 149902319 149902333 STAT1 JASPAR yes 66887191
chr5 149902319 149902333 STAT1 JASPAR yes 70738893
chr5 149902339 149902349 ZNF740 JASPAR yes 66887192
chr5 149902339 149902349 ZNF740 JASPAR yes 70738894
chr5 149902344 149902349 SP1 TRANSFAC yes 66887193
chr5 149902344 149902349 SP1 TRANSFAC yes 70738895
chr5 149902357 149902361 YY1 TRANSFAC yes 66887194
chr5 149902357 149902361 YY1 TRANSFAC yes 70738896
chr5 149902360 149902364 YY1 TRANSFAC yes 66887195
chr5 149902360 149902364 YY1 TRANSFAC yes 70738897
chr5 149902377 149902383 LEF1 TRANSFAC yes 66887196
chr5 149902377 149902383 TCF4 TRANSFAC yes 66887197
chr5 149902377 149902383 LEF1 TRANSFAC yes 70738898
chr5 149902377 149902383 TCF4 TRANSFAC yes 70738899
chr5 149902379 149902394 ESR2 JASPAR yes 66887198
chr5 149902379 149902394 ESR2 JASPAR yes 70738900
chr5 149902413 149902423 NEUROD2 JASPAR yes 66887199
chr5 149902413 149902423 NEUROD2 JASPAR yes 70738901
chr5 149902413 149902424 USF1 JASPAR yes 66887200
chr5 149902413 149902424 USF2 JASPAR yes 66887201
chr5 149902413 149902424 USF1 JASPAR yes 70738902
chr5 149902413 149902424 USF2 JASPAR yes 70738903
chr5 149902414 149902424 MAX JASPAR yes 66887202
chr5 149902414 149902424 MAX JASPAR yes 70738904
chr5 149902429 149902435 TCF4 TRANSFAC yes 66887203
chr5 149902429 149902435 TCF4 TRANSFAC yes 70738905
chr5 149902434 149902449 HSF1 JASPAR yes 66887204
chr5 149902434 149902449 HSF1 JASPAR yes 70738906
chr5 149902437 149902452 STAT1 JASPAR yes 66887205
chr5 149902437 149902452 STAT1 JASPAR yes 70738907
chr5 149902439 149902450 STAT1 JASPAR yes 66887206
chr5 149902439 149902450 STAT3 JASPAR yes 66887207
chr5 149902439 149902450 STAT1 JASPAR yes 70738908
chr5 149902439 149902450 STAT3 JASPAR yes 70738909
chr5 149902442 149902449 ETS1 TRANSFAC yes 66887208
chr5 149902442 149902449 ETS1 TRANSFAC yes 70738910
chr5 149902457 149902467 NKX2-3 JASPAR yes 66887209
chr5 149902457 149902467 NKX2-3 JASPAR yes 70738911
chr5 149902458 149902466 ISL2 JASPAR yes 66887210
chr5 149902458 149902466 ISL2 JASPAR yes 70738912
chr5 149902458 149902467 NKX3-2 JASPAR yes 66887211
chr5 149902458 149902467 NKX3-2 JASPAR yes 70738913
SNP sites on vista49659[chr5:149902198-149902484]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 149902245 rs58921756 G A
EP300 FOXA1 FOXA2 HNF4A MYBL2 NFIC RREB1 SP1 TEAD4
8615533
chr5 149902311 rs139325717 A G
EP300 FOXA1 FOXA2 HNF4A IRF1 MYBL2 NFIC SOX10 SP1 STAT2 TEAD4
8615534
chr5 149902335 rs2748217 G C
EP300 FOXA1 FOXA2 MYBL2 NFIC SP1
8615535
chr5 149902468 rs76940454 C T
EP300
8615536
Genes possibly regulated by vista49659[chr5:149902198-149902484]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 149822753 149829319 - RPS14 ENSG00000164587.7 149829319 0.72 1.0 5881 27121
chr5 149865381 149937773 + NDST1 ENSG00000070614.10 149865381 0.65 1.0 5882 63183
chr5 149980642 150038782 + SYNPO ENSG00000171992.8 149980642 0.8 1.0 5883 21842
Expression level of Genes
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miRNAs possibly regulated by vista49659[chr5:149902198-149902484]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results