EnhancerDB
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  3. vista49660[chr5:149921548-149921861]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49660[chr5:149921548-149921861]
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Tissue distribution of vista49660
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Transcription factor that possibly regulate vista49660[chr5:149921548-149921861]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 149921563 149921843 STAT3 UCSC Txn Factor no Conserved 108537002
chr5 149921549 149921555 SOX10 JASPAR yes 70738914
chr5 149921562 149921572 CUX1 JASPAR yes 70738915
chr5 149921562 149921572 CUX2 JASPAR yes 70738916
chr5 149921562 149921572 PAX3 JASPAR yes 70738917
chr5 149921562 149921572 PAX7 JASPAR yes 70738918
chr5 149921564 149921573 VENTX JASPAR yes 70738919
chr5 149921564 149921574 EN2 JASPAR yes 70738920
chr5 149921564 149921574 ESX1 JASPAR yes 70738921
chr5 149921564 149921574 GBX1 JASPAR yes 70738922
chr5 149921564 149921574 GBX2 JASPAR yes 70738923
chr5 149921564 149921574 HESX1 JASPAR yes 70738924
chr5 149921564 149921574 LBX2 JASPAR yes 70738925
chr5 149921564 149921574 LHX2 JASPAR yes 70738926
chr5 149921564 149921574 MIXL1 JASPAR yes 70738927
chr5 149921564 149921574 RAX JASPAR yes 70738928
chr5 149921565 149921573 LHX9 JASPAR yes 70738929
chr5 149921565 149921573 SHOX JASPAR yes 70738930
chr5 149921579 149921592 ZBTB18 JASPAR yes 70738931
chr5 149921584 149921605 ZNF263 JASPAR yes 70738932
chr5 149921601 149921617 SOX4 JASPAR yes 70738933
chr5 149921623 149921627 YY1 TRANSFAC yes 70738934
chr5 149921657 149921668 NFKB1 JASPAR yes 70738935
chr5 149921658 149921662 LFA1 TRANSFAC yes 70738936
chr5 149921667 149921671 YY1 TRANSFAC yes 70738937
chr5 149921680 149921695 HNF4G JASPAR yes 70738938
chr5 149921681 149921695 NR2F1 JASPAR yes 70738939
chr5 149921681 149921696 HNF4A JASPAR yes 70738940
chr5 149921714 149921725 TBX20 JASPAR yes 70738941
chr5 149921715 149921725 TBX21 JASPAR yes 70738942
chr5 149921716 149921719 MYB TRANSFAC yes 70738943
chr5 149921726 149921737 CEBPA JASPAR yes 70738944
chr5 149921750 149921765 HNF4A JASPAR yes 70738945
chr5 149921751 149921765 NR2F1 JASPAR yes 70738946
chr5 149921751 149921765 RXRB JASPAR yes 70738947
chr5 149921751 149921765 RXRG JASPAR yes 70738948
chr5 149921751 149921766 HNF4G JASPAR yes 70738949
chr5 149921751 149921766 NR2C2 JASPAR yes 70738950
chr5 149921757 149921775 ESR1 JASPAR yes 70738951
chr5 149921757 149921775 ESR2 JASPAR yes 70738952
chr5 149921758 149921773 ESR2 JASPAR yes 70738953
chr5 149921765 149921776 ESRRA JASPAR yes 70738954
chr5 149921765 149921776 ESRRB JASPAR yes 70738955
chr5 149921767 149921777 RORA JASPAR yes 70738956
chr5 149921785 149921796 HOXA10 JASPAR yes 70738957
chr5 149921786 149921796 GBX2 JASPAR yes 70738958
chr5 149921786 149921796 MNX1 JASPAR yes 70738959
chr5 149921787 149921795 BARX1 JASPAR yes 70738960
chr5 149921787 149921795 BSX JASPAR yes 70738961
chr5 149921787 149921795 ISL2 JASPAR yes 70738962
chr5 149921787 149921795 LMX1B JASPAR yes 70738963
chr5 149921787 149921795 MSX1 JASPAR yes 70738964
chr5 149921787 149921795 MSX2 JASPAR yes 70738965
chr5 149921790 149921801 CEBPA JASPAR yes 70738966
chr5 149921792 149921798 NFIC JASPAR yes 70738967
chr5 149921830 149921834 YY1 TRANSFAC yes 70738968
SNP sites on vista49660[chr5:149921548-149921861]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista49660[chr5:149921548-149921861]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 149822753 149829319 - RPS14 ENSG00000164587.7 149829319 0.72 1.0 5881 7771
chr5 149865381 149937773 + NDST1 ENSG00000070614.10 149865381 0.65 1.0 5882 43833
chr5 149980642 150038782 + SYNPO ENSG00000171992.8 149980642 0.8 1.0 5883 41219
Expression level of Genes
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miRNAs possibly regulated by vista49660[chr5:149921548-149921861]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results