EnhancerDB
  1. Home
  2. Enhancers
  3. vista49675[chr5:150161319-150161633]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49675[chr5:150161319-150161633]
Back to top
Tissue distribution of vista49675
Back to top
Transcription factor that possibly regulate vista49675[chr5:150161319-150161633]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 150160297 150162314 POLR2A UCSC Txn Factor no Conserved 108537011
chr5 150161318 150161322 NFE TRANSFAC yes 66899822
chr5 150161318 150161322 NFE TRANSFAC yes 70739622
chr5 150161333 150161342 THAP1 JASPAR yes 66899823
chr5 150161333 150161342 THAP1 JASPAR yes 70739623
chr5 150161360 150161366 LEF1 TRANSFAC yes 66899824
chr5 150161360 150161366 SOX10 JASPAR yes 66899825
chr5 150161360 150161366 LEF1 TRANSFAC yes 70739624
chr5 150161360 150161366 SOX10 JASPAR yes 70739625
chr5 150161383 150161392 NKX3-2 JASPAR yes 66899826
chr5 150161383 150161392 NKX3-2 JASPAR yes 70739626
chr5 150161384 150161392 ISL2 JASPAR yes 66899827
chr5 150161384 150161392 ISL2 JASPAR yes 70739627
chr5 150161387 150161398 FOSL2 JASPAR yes 66899828
chr5 150161387 150161398 JUNB JASPAR yes 66899829
chr5 150161387 150161398 FOSL2 JASPAR yes 70739628
chr5 150161387 150161398 JUNB JASPAR yes 70739629
chr5 150161388 150161405 BCL6B JASPAR yes 66899830
chr5 150161388 150161405 BCL6B JASPAR yes 70739630
chr5 150161407 150161419 PBX1 JASPAR yes 66899831
chr5 150161407 150161419 PBX1 JASPAR yes 70739631
chr5 150161413 150161418 GATA2 JASPAR yes 66899832
chr5 150161413 150161418 GATA2 JASPAR yes 70739632
chr5 150161429 150161440 SPDEF JASPAR yes 66899833
chr5 150161429 150161440 SPDEF JASPAR yes 70739633
chr5 150161439 150161444 TFAP2A TRANSFAC yes 66899834
chr5 150161439 150161444 TFAP2A TRANSFAC yes 70739634
chr5 150161439 150161445 MZF1 JASPAR yes 66899835
chr5 150161439 150161445 MZF1 JASPAR yes 70739635
chr5 150161490 150161508 NFYA JASPAR yes 66899836
chr5 150161490 150161508 NFYA JASPAR yes 70739636
chr5 150161493 150161509 NFYA JASPAR yes 66899837
chr5 150161493 150161509 NFYA JASPAR yes 70739637
chr5 150161496 150161511 NFYB JASPAR yes 66899838
chr5 150161496 150161511 NFYB JASPAR yes 70739638
chr5 150161498 150161503 NFY TRANSFAC yes 66899839
chr5 150161498 150161503 NFY TRANSFAC yes 70739639
chr5 150161505 150161511 ESR1 TRANSFAC yes 66899840
chr5 150161505 150161511 ESR1 TRANSFAC yes 70739640
chr5 150161507 150161511 ESR1 TRANSFAC yes 66899841
chr5 150161507 150161511 ESR1 TRANSFAC yes 70739641
chr5 150161507 150161518 USF1 JASPAR yes 66899842
chr5 150161507 150161518 USF1 JASPAR yes 70739642
chr5 150161514 150161526 HES7 JASPAR yes 66899843
chr5 150161514 150161526 HES7 JASPAR yes 70739643
chr5 150161553 150161567 TCF7L2 JASPAR yes 66899844
chr5 150161553 150161567 TCF7L2 JASPAR yes 70739644
chr5 150161574 150161584 NFATC3 JASPAR yes 66899845
chr5 150161574 150161584 NFATC3 JASPAR yes 70739645
chr5 150161575 150161582 NFATC2 JASPAR yes 66899846
chr5 150161575 150161582 NFATC2 JASPAR yes 70739646
chr5 150161580 150161584 YY1 TRANSFAC yes 66899847
chr5 150161580 150161584 YY1 TRANSFAC yes 70739647
chr5 150161582 150161592 NFATC3 JASPAR yes 66899848
chr5 150161582 150161592 NFATC3 JASPAR yes 70739648
chr5 150161583 150161590 NFATC2 JASPAR yes 66899849
chr5 150161583 150161590 NFATC2 JASPAR yes 70739649
chr5 150161601 150161611 GATA1 TRANSFAC yes 66899850
chr5 150161601 150161611 GATA1 TRANSFAC yes 70739650
chr5 150161604 150161614 NFATC3 JASPAR yes 66899851
chr5 150161604 150161614 NFATC3 JASPAR yes 70739651
chr5 150161607 150161617 RELA JASPAR yes 66899852
chr5 150161607 150161617 RELA JASPAR yes 70739652
SNP sites on vista49675[chr5:150161319-150161633]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 150161323 rs188545325 C T
POLR2A
8616899
chr5 150161325 rs139762369 CG C
POLR2A
8616900
chr5 150161353 rs17111358 A G
POLR2A
8616901
chr5 150161371 rs116653862 C T
POLR2A
8616902
chr5 150161385 rs114263835 G A
ISL2 NKX3-2 POLR2A
8616903
chr5 150161398 rs78652279 G T
BCL6B FOSL2 JUNB POLR2A
8616904
chr5 150161452 rs77021941 C T
POLR2A
8616905
chr5 150161552 rs542312860 G A
POLR2A
8616906
chr5 150161630 rs113998374 T C
POLR2A
8616907
Genes possibly regulated by vista49675[chr5:150161319-150161633]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 150070356 150080669 - RBM22 ENSG00000086589.7 150080669 0.62 1.0 5885 19350
chr5 150088002 150138671 - DCTN4 ENSG00000132912.8 150138671 0.67 1.0 5886 77352
chr5 150157508 150176296 + SMIM3 ENSG00000256235.1 150157508 0.97 0.96 5887 96189
chr5 150157867 150176297 + AC010441.1 ENSG00000269636.1 150157867 0.92 0.9 5888 96548
chr5 150226085 150280298 + IRGM ENSG00000237693.4 150226085 0.96 1.0 5889 35548
Expression level of Genes
Back to top
miRNAs possibly regulated by vista49675[chr5:150161319-150161633]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results