EnhancerDB
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  3. vista49679[chr5:150261861-150262245]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49679[chr5:150261861-150262245]
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Tissue distribution of vista49679
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Transcription factor that possibly regulate vista49679[chr5:150261861-150262245]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 150261867 150261872 ETS2 TRANSFAC yes 70739869
chr5 150261867 150261882 LEF1 JASPAR yes 70739870
chr5 150261872 150261878 SOX10 JASPAR yes 70739871
chr5 150261898 150261910 MEF2A JASPAR yes 70739872
chr5 150261898 150261910 MEF2B JASPAR yes 70739873
chr5 150261898 150261910 MEF2D JASPAR yes 70739874
chr5 150261900 150261911 CDX2 JASPAR yes 70739875
chr5 150261901 150261912 HOXA10 JASPAR yes 70739876
chr5 150261902 150261911 CDX1 JASPAR yes 70739877
chr5 150261902 150261912 HOXA13 JASPAR yes 70739878
chr5 150261902 150261912 HOXD13 JASPAR yes 70739879
chr5 150261920 150261923 MYB TRANSFAC yes 70739880
chr5 150261927 150261934 NKX3-1 JASPAR yes 70739881
chr5 150261930 150261946 POU4F3 JASPAR yes 70739882
chr5 150261931 150261941 CUX1 JASPAR yes 70739883
chr5 150261931 150261941 CUX2 JASPAR yes 70739884
chr5 150261932 150261947 HNF1A JASPAR yes 70739885
chr5 150261933 150261946 HNF1B JASPAR yes 70739886
chr5 150261934 150261946 HNF1B JASPAR yes 70739887
chr5 150261936 150261946 EVX1 JASPAR yes 70739888
chr5 150261936 150261946 POU6F1 JASPAR yes 70739889
chr5 150261937 150261947 POU6F2 JASPAR yes 70739890
chr5 150261948 150261959 FOXA1 JASPAR yes 70739891
chr5 150261948 150261961 POU2F2 JASPAR yes 70739892
chr5 150261948 150261963 FOXA1 JASPAR yes 70739893
chr5 150261949 150261958 POU3F4 JASPAR yes 70739894
chr5 150261949 150261958 POU5F1B JASPAR yes 70739895
chr5 150261949 150261960 FOXB1 JASPAR yes 70739896
chr5 150261949 150261960 FOXC1 JASPAR yes 70739897
chr5 150261949 150261961 FOXC2 JASPAR yes 70739898
chr5 150261953 150261964 PHOX2A JASPAR yes 70739899
chr5 150261953 150261964 PROP1 JASPAR yes 70739900
chr5 150261954 150261964 PAX7 JASPAR yes 70739901
chr5 150261957 150261970 DUXA JASPAR yes 70739902
chr5 150261958 150261969 DUX4 JASPAR yes 70739903
chr5 150261971 150261992 IRF1 JASPAR yes 70739904
chr5 150261975 150261990 PRDM1 JASPAR yes 70739905
chr5 150261986 150262000 POU4F1 JASPAR yes 70739906
chr5 150261986 150262002 POU4F2 JASPAR yes 70739907
chr5 150261986 150262002 POU4F3 JASPAR yes 70739908
chr5 150261989 150261999 BARHL2 JASPAR yes 70739909
chr5 150261990 150262004 ONECUT2 JASPAR yes 70739910
chr5 150261990 150262004 ONECUT3 JASPAR yes 70739911
chr5 150262045 150262066 IRF1 JASPAR yes 70739912
chr5 150262049 150262053 TEAD2 TRANSFAC yes 70739913
chr5 150262051 150262054 MYB TRANSFAC yes 70739914
chr5 150262064 150262074 NFATC3 JASPAR yes 70739915
chr5 150262065 150262080 PRDM1 JASPAR yes 70739916
chr5 150262067 150262088 IRF1 JASPAR yes 70739917
chr5 150262069 150262084 IRF9 JASPAR yes 70739918
chr5 150262070 150262084 IRF7 JASPAR yes 70739919
chr5 150262070 150262084 IRF8 JASPAR yes 70739920
chr5 150262071 150262085 STAT1 JASPAR yes 70739921
chr5 150262071 150262086 PRDM1 JASPAR yes 70739922
chr5 150262071 150262086 STAT2 JASPAR yes 70739923
chr5 150262071 150262089 IRF2 JASPAR yes 70739924
chr5 150262072 150262084 IRF1 JASPAR yes 70739925
chr5 150262092 150262100 GATA3 JASPAR yes 70739926
chr5 150262098 150262113 FOXP1 JASPAR yes 70739927
chr5 150262099 150262112 POU2F2 JASPAR yes 70739928
chr5 150262100 150262109 POU5F1B JASPAR yes 70739929
chr5 150262100 150262111 FOXB1 JASPAR yes 70739930
chr5 150262100 150262111 FOXC1 JASPAR yes 70739931
chr5 150262100 150262112 FOXC2 JASPAR yes 70739932
chr5 150262103 150262118 STAT2 JASPAR yes 70739933
chr5 150262105 150262126 IRF1 JASPAR yes 70739934
chr5 150262134 150262141 NKX3-1 JASPAR yes 70739935
chr5 150262143 150262157 GATA2 JASPAR yes 70739936
chr5 150262145 150262153 GATA3 JASPAR yes 70739937
chr5 150262167 150262181 TCF7L2 JASPAR yes 70739938
chr5 150262189 150262200 NFE2L2 JASPAR yes 70739939
chr5 150262196 150262199 MYB TRANSFAC yes 70739940
chr5 150262227 150262231 TEAD2 TRANSFAC yes 70739941
chr5 150262227 150262236 SRY JASPAR yes 70739942
chr5 150262229 150262232 MYB TRANSFAC yes 70739943
SNP sites on vista49679[chr5:150261861-150262245]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 150261887 rs542968659 GAAC G no 8617121
chr5 150261924 rs115828275 C T no 8617122
chr5 150261998 rs559127964 AT A
BARHL2 ONECUT2 ONECUT3 POU4F1 POU4F2 POU4F3
8617123
chr5 150262092 rs79026229 A G
GATA3
8617124
chr5 150262142 rs1820682 T C no 8617125
chr5 150262207 rs144712100 G C no 8617126
Genes possibly regulated by vista49679[chr5:150261861-150262245]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 150226085 150280298 + IRGM ENSG00000237693.4 150226085 0.96 1.0 5889 64224
chr5 150273954 150284545 - ZNF300 ENSG00000145908.8 150284545 0.84 0.86 5890 77700
Expression level of Genes
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miRNAs possibly regulated by vista49679[chr5:150261861-150262245]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results