EnhancerDB
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  3. vista49681[chr5:150379028-150379237]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49681[chr5:150379028-150379237]
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Tissue distribution of vista49681
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Transcription factor that possibly regulate vista49681[chr5:150379028-150379237]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 150379040 150379057 RARA JASPAR yes 66905231
chr5 150379040 150379057 RXRA JASPAR yes 66905232
chr5 150379040 150379057 RARA JASPAR yes 70739993
chr5 150379040 150379057 RXRA JASPAR yes 70739994
chr5 150379045 150379058 JUN JASPAR yes 66905233
chr5 150379045 150379058 JUN JASPAR yes 70739995
chr5 150379070 150379084 TCF7L2 JASPAR yes 66905234
chr5 150379070 150379084 TCF7L2 JASPAR yes 70739996
chr5 150379070 150379085 LEF1 JASPAR yes 66905235
chr5 150379070 150379085 LEF1 JASPAR yes 70739997
chr5 150379074 150379080 TCF1 TRANSFAC yes 66905236
chr5 150379074 150379080 TCF1 TRANSFAC yes 70739998
chr5 150379074 150379081 TCF4 TRANSFAC yes 66905237
chr5 150379074 150379081 TCF4 TRANSFAC yes 70739999
chr5 150379104 150379107 MYB TRANSFAC yes 66905238
chr5 150379104 150379107 MYB TRANSFAC yes 70740000
chr5 150379126 150379137 NFE2L2 JASPAR yes 66905239
chr5 150379126 150379137 NFE2L2 JASPAR yes 70740001
chr5 150379133 150379148 RUNX2 JASPAR yes 66905240
chr5 150379133 150379148 RUNX2 JASPAR yes 70740002
chr5 150379139 150379160 ZNF263 JASPAR yes 66905241
chr5 150379139 150379160 ZNF263 JASPAR yes 70740003
chr5 150379150 150379161 E2F6 JASPAR yes 66905242
chr5 150379150 150379161 E2F6 JASPAR yes 70740004
chr5 150379161 150379172 TBX2 JASPAR yes 66905243
chr5 150379161 150379172 TBX2 JASPAR yes 70740005
chr5 150379174 150379178 ESR1 TRANSFAC yes 66905244
chr5 150379174 150379178 ESR1 TRANSFAC yes 70740006
chr5 150379181 150379193 TAL1 JASPAR yes 66905245
chr5 150379181 150379193 TAL1 JASPAR yes 70740007
chr5 150379183 150379189 YY1 JASPAR yes 66905246
chr5 150379183 150379189 YY1 JASPAR yes 70740008
chr5 150379190 150379199 ZEB1 JASPAR yes 66905247
chr5 150379190 150379199 ZEB1 JASPAR yes 70740009
chr5 150379190 150379205 SCRT1 JASPAR yes 66905248
chr5 150379190 150379205 SCRT1 JASPAR yes 70740010
chr5 150379191 150379201 FIGLA JASPAR yes 66905249
chr5 150379191 150379201 FIGLA JASPAR yes 70740011
chr5 150379193 150379198 USF2 TRANSFAC yes 66905250
chr5 150379193 150379198 USF2 TRANSFAC yes 70740012
chr5 150379194 150379200 PTF TRANSFAC yes 66905251
chr5 150379194 150379200 PTF TRANSFAC yes 70740013
chr5 150379199 150379220 ZNF263 JASPAR yes 66905252
chr5 150379199 150379220 ZNF263 JASPAR yes 70740014
chr5 150379234 150379253 REST JASPAR yes 66905253
chr5 150379234 150379253 REST JASPAR yes 70740015
SNP sites on vista49681[chr5:150379028-150379237]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 150379063 rs181684948 C G no 8617440
Genes possibly regulated by vista49681[chr5:150379028-150379237]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 150273954 150284545 - ZNF300 ENSG00000145908.8 150284545 0.84 0.86 5890 5517
chr5 150400124 150408554 + GPX3 ENSG00000211445.7 150400124 0.87 0.96 5891 79113
chr5 150409506 150473138 - TNIP1 ENSG00000145901.10 150473138 0.64 1.0 5892 6099
Expression level of Genes
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miRNAs possibly regulated by vista49681[chr5:150379028-150379237]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results