EnhancerDB
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  3. vista49711[chr5:150873344-150873758]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49711[chr5:150873344-150873758]
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Tissue distribution of vista49711
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Transcription factor that possibly regulate vista49711[chr5:150873344-150873758]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 150873349 150873368 CTCF JASPAR yes 70741821
chr5 150873357 150873364 SPIB JASPAR yes 70741822
chr5 150873358 150873366 EHF JASPAR yes 70741823
chr5 150873366 150873380 EBF1 JASPAR yes 70741824
chr5 150873380 150873395 TFAP2A JASPAR yes 70741825
chr5 150873411 150873423 BHLHE23 JASPAR yes 70741826
chr5 150873411 150873423 PKNOX1 JASPAR yes 70741827
chr5 150873411 150873423 PKNOX2 JASPAR yes 70741828
chr5 150873411 150873423 TGIF1 JASPAR yes 70741829
chr5 150873411 150873423 TGIF2 JASPAR yes 70741830
chr5 150873412 150873422 BHLHE22 JASPAR yes 70741831
chr5 150873412 150873422 NEUROD2 JASPAR yes 70741832
chr5 150873412 150873422 NEUROG2 JASPAR yes 70741833
chr5 150873412 150873422 OLIG1 JASPAR yes 70741834
chr5 150873412 150873422 OLIG2 JASPAR yes 70741835
chr5 150873412 150873422 OLIG3 JASPAR yes 70741836
chr5 150873428 150873434 SOX10 JASPAR yes 70741837
chr5 150873440 150873460 TP53 JASPAR yes 70741838
chr5 150873445 150873449 YY1 TRANSFAC yes 70741839
chr5 150873455 150873473 MAFF JASPAR yes 70741840
chr5 150873457 150873468 NRL JASPAR yes 70741841
chr5 150873457 150873472 MAFK JASPAR yes 70741842
chr5 150873492 150873506 SPI1 JASPAR yes 70741843
chr5 150873513 150873517 NFE TRANSFAC yes 70741844
chr5 150873540 150873551 ELK4 JASPAR yes 70741845
chr5 150873540 150873551 FLI1 JASPAR yes 70741846
chr5 150873541 150873551 ETV6 JASPAR yes 70741847
chr5 150873541 150873551 GABPA JASPAR yes 70741848
chr5 150873541 150873554 ELF1 JASPAR yes 70741849
chr5 150873542 150873549 SPI1 JASPAR yes 70741850
chr5 150873542 150873550 EHF JASPAR yes 70741851
chr5 150873544 150873551 SPIB JASPAR yes 70741852
chr5 150873578 150873591 SMAD2 JASPAR yes 70741853
chr5 150873589 150873603 POU4F1 JASPAR yes 70741854
chr5 150873589 150873605 POU4F2 JASPAR yes 70741855
chr5 150873589 150873605 POU4F3 JASPAR yes 70741856
chr5 150873599 150873603 YY1 TRANSFAC yes 70741857
chr5 150873611 150873615 YY1 TRANSFAC yes 70741858
chr5 150873620 150873629 VENTX JASPAR yes 70741859
chr5 150873637 150873652 STAT1 JASPAR yes 70741860
chr5 150873639 150873650 STAT3 JASPAR yes 70741861
chr5 150873660 150873669 ZEB1 JASPAR yes 70741862
chr5 150873675 150873679 YY1 TRANSFAC yes 70741863
chr5 150873727 150873742 TFAP2A JASPAR yes 70741864
chr5 150873727 150873742 TFAP2C JASPAR yes 70741865
chr5 150873728 150873739 TFAP2A JASPAR yes 70741866
chr5 150873728 150873739 TFAP2B JASPAR yes 70741867
chr5 150873728 150873739 TFAP2C JASPAR yes 70741868
chr5 150873729 150873738 TFAP2A JASPAR yes 70741869
chr5 150873739 150873745 TCF4 TRANSFAC yes 70741870
SNP sites on vista49711[chr5:150873344-150873758]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 150873344 rs541619111 CTGT C no 8620692
chr5 150873578 rs77206978 G A
SMAD2
8620693
chr5 150873708 rs137999266 G A no 8620694
chr5 150873732 rs56908173 C G
TFAP2A TFAP2B TFAP2C
8620695
Genes possibly regulated by vista49711[chr5:150873344-150873758]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 150816607 150871942 + SLC36A1 ENSG00000123643.8 150816607 0.79 0.99 5898 43263
chr5 150883654 150948505 - FAT2 ENSG00000086570.8 150948505 0.98 1.0 5899 25253
Expression level of Genes
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miRNAs possibly regulated by vista49711[chr5:150873344-150873758]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 150901649 150901670 - hsa-miR-6499-3p MIMAT0025451 150947445 0.007121358701494142 0.916667 0.0 1334
Expression level of miRNAs
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