EnhancerDB
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  3. vista49712[chr5:150902961-150903053]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49712[chr5:150902961-150903053]
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Tissue distribution of vista49712
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Transcription factor that possibly regulate vista49712[chr5:150902961-150903053]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 150902927 150903537 CTCF UCSC Txn Factor no Conserved 108537048
chr5 150902975 150903240 RAD21 UCSC Txn Factor no Conserved 108537049
chr5 150902980 150902984 TEAD2 TRANSFAC yes 70741871
chr5 150902982 150902985 MYB TRANSFAC yes 70741872
chr5 150902987 150903001 PLAG1 JASPAR yes 70741873
chr5 150903006 150903009 MYB TRANSFAC yes 70741874
chr5 150903014 150903025 ESRRA JASPAR yes 70741875
chr5 150903014 150903025 ESRRB JASPAR yes 70741876
chr5 150903014 150903027 NR2F1 JASPAR yes 70741877
chr5 150903018 150903022 ESR1 TRANSFAC yes 70741878
chr5 150903030 150903044 GATA2 JASPAR yes 70741879
chr5 150903032 150903040 GATA3 JASPAR yes 70741880
chr5 150903032 150903040 GATA5 JASPAR yes 70741881
SNP sites on vista49712[chr5:150902961-150903053]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 150903026 rs544244536 C A
CTCF NR2F1 RAD21
8620827
Genes possibly regulated by vista49712[chr5:150902961-150903053]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 150816607 150871942 + SLC36A1 ENSG00000123643.8 150816607 0.79 0.99 5898 13646
chr5 150883654 150948505 - FAT2 ENSG00000086570.8 150948505 0.98 1.0 5899 54548
Expression level of Genes
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miRNAs possibly regulated by vista49712[chr5:150902961-150903053]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 150901649 150901670 - hsa-miR-6499-3p MIMAT0025451 150947445 0.01178615904643302 0.916667 0.0 1334
Expression level of miRNAs
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