EnhancerDB
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  3. vista49716[chr5:151017311-151017607]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49716[chr5:151017311-151017607]
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Tissue distribution of vista49716
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Transcription factor that possibly regulate vista49716[chr5:151017311-151017607]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 151017304 151017315 SPDEF JASPAR yes 66940470
chr5 151017304 151017315 SPDEF JASPAR yes 70742016
chr5 151017330 151017338 FOXO3 JASPAR yes 66940471
chr5 151017330 151017338 FOXO3 JASPAR yes 70742017
chr5 151017343 151017349 SOX10 JASPAR yes 66940472
chr5 151017343 151017349 SOX10 JASPAR yes 70742018
chr5 151017398 151017402 H1TF2 TRANSFAC yes 66940473
chr5 151017398 151017402 NFE TRANSFAC yes 66940474
chr5 151017398 151017402 SRF TRANSFAC yes 66940475
chr5 151017398 151017402 H1TF2 TRANSFAC yes 70742019
chr5 151017398 151017402 NFE TRANSFAC yes 70742020
chr5 151017398 151017402 SRF TRANSFAC yes 70742021
chr5 151017485 151017490 GATA2 JASPAR yes 66940476
chr5 151017485 151017490 GATA2 JASPAR yes 70742022
chr5 151017496 151017500 LFA1 TRANSFAC yes 66940477
chr5 151017496 151017500 LFA1 TRANSFAC yes 70742023
chr5 151017512 151017525 POU2F2 JASPAR yes 66940478
chr5 151017512 151017525 POU2F2 JASPAR yes 70742024
chr5 151017554 151017564 NHLH1 JASPAR yes 66940479
chr5 151017554 151017564 NHLH1 JASPAR yes 70742025
chr5 151017569 151017583 SPI1 JASPAR yes 66940480
chr5 151017569 151017583 SPIC JASPAR yes 66940481
chr5 151017569 151017583 SPI1 JASPAR yes 70742026
chr5 151017569 151017583 SPIC JASPAR yes 70742027
chr5 151017571 151017583 EHF JASPAR yes 66940482
chr5 151017571 151017583 ELF1 JASPAR yes 66940483
chr5 151017571 151017583 ELF4 JASPAR yes 66940484
chr5 151017571 151017583 EHF JASPAR yes 70742028
chr5 151017571 151017583 ELF1 JASPAR yes 70742029
chr5 151017571 151017583 ELF4 JASPAR yes 70742030
chr5 151017572 151017583 ELF5 JASPAR yes 66940485
chr5 151017572 151017583 ELF5 JASPAR yes 70742031
chr5 151017575 151017581 ETS1 JASPAR yes 66940486
chr5 151017575 151017581 SPI1 JASPAR yes 66940487
chr5 151017575 151017581 ETS1 JASPAR yes 70742032
chr5 151017575 151017581 SPI1 JASPAR yes 70742033
chr5 151017592 151017597 ETS2 TRANSFAC yes 66940488
chr5 151017592 151017597 ETS2 TRANSFAC yes 70742034
chr5 151017598 151017613 RUNX2 JASPAR yes 66940489
chr5 151017598 151017613 RUNX2 JASPAR yes 70742035
chr5 151017599 151017608 RUNX2 JASPAR yes 66940490
chr5 151017599 151017608 RUNX2 JASPAR yes 70742036
chr5 151017599 151017609 RUNX3 JASPAR yes 66940491
chr5 151017599 151017609 RUNX3 JASPAR yes 70742037
chr5 151017599 151017610 RUNX1 JASPAR yes 66940492
chr5 151017599 151017610 RUNX1 JASPAR yes 70742038
SNP sites on vista49716[chr5:151017311-151017607]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 151017323 rs191685762 G A no 8621636
chr5 151017343 rs114266383 C A,G
SOX10
8621637
chr5 151017356 rs150857955 TG T no 8621638
chr5 151017426 rs34681778 C T no 8621639
chr5 151017519 rs566370859 A G
POU2F2
8621640
chr5 151017521 rs4958475 A G
POU2F2
8621641
chr5 151017556 rs150826188 A G
NHLH1
8621642
Genes possibly regulated by vista49716[chr5:151017311-151017607]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 150883654 150948505 - FAT2 ENSG00000086570.8 150948505 0.98 1.0 5899 31194
chr5 151040657 151066726 - SPARC ENSG00000113140.6 151066726 0.86 0.97 5900 50881
Expression level of Genes
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miRNAs possibly regulated by vista49716[chr5:151017311-151017607]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results