EnhancerDB
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  3. vista49759[chr5:154007617-154007930]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49759[chr5:154007617-154007930]
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Tissue distribution of vista49759
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Transcription factor that possibly regulate vista49759[chr5:154007617-154007930]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 154007618 154007623 ETS2 TRANSFAC yes 67042587
chr5 154007618 154007623 ETS2 TRANSFAC yes 70743795
chr5 154007638 154007642 ESR1 TRANSFAC yes 67042588
chr5 154007638 154007642 ESR1 TRANSFAC yes 70743796
chr5 154007644 154007650 SP1 TRANSFAC yes 67042589
chr5 154007644 154007650 SP1 TRANSFAC yes 70743797
chr5 154007661 154007674 NR2F1 JASPAR yes 67042590
chr5 154007661 154007674 NR2F1 JASPAR yes 70743798
chr5 154007664 154007675 CDX2 JASPAR yes 67042591
chr5 154007664 154007675 CDX2 JASPAR yes 70743799
chr5 154007664 154007679 ESR2 JASPAR yes 67042592
chr5 154007664 154007679 ESR2 JASPAR yes 70743800
chr5 154007665 154007669 ESR1 TRANSFAC yes 67042593
chr5 154007665 154007669 ESR1 TRANSFAC yes 70743801
chr5 154007665 154007676 HOXA10 JASPAR yes 67042594
chr5 154007665 154007676 HOXC11 JASPAR yes 67042595
chr5 154007665 154007676 HOXC12 JASPAR yes 67042596
chr5 154007665 154007676 HOXA10 JASPAR yes 70743802
chr5 154007665 154007676 HOXC11 JASPAR yes 70743803
chr5 154007665 154007676 HOXC12 JASPAR yes 70743804
chr5 154007666 154007675 CDX1 JASPAR yes 67042597
chr5 154007666 154007675 CDX1 JASPAR yes 70743805
chr5 154007666 154007676 HOXC10 JASPAR yes 67042598
chr5 154007666 154007676 HOXC10 JASPAR yes 70743806
chr5 154007676 154007692 NFYA JASPAR yes 67042599
chr5 154007676 154007692 NFYA JASPAR yes 70743807
chr5 154007677 154007695 NFYA JASPAR yes 67042600
chr5 154007677 154007695 NFYA JASPAR yes 70743808
chr5 154007681 154007685 H1TF2 TRANSFAC yes 67042601
chr5 154007681 154007685 NFE TRANSFAC yes 67042602
chr5 154007681 154007685 SRF TRANSFAC yes 67042603
chr5 154007681 154007685 H1TF2 TRANSFAC yes 70743809
chr5 154007681 154007685 NFE TRANSFAC yes 70743810
chr5 154007681 154007685 SRF TRANSFAC yes 70743811
chr5 154007759 154007763 YY1 TRANSFAC yes 67042604
chr5 154007759 154007763 YY1 TRANSFAC yes 70743812
chr5 154007774 154007779 H4TF1 TRANSFAC yes 67042605
chr5 154007774 154007779 H4TF1 TRANSFAC yes 70743813
chr5 154007805 154007810 GATA2 JASPAR yes 67042606
chr5 154007805 154007810 GATA2 JASPAR yes 70743814
chr5 154007810 154007822 POU3F1 JASPAR yes 67042607
chr5 154007810 154007822 POU3F2 JASPAR yes 67042608
chr5 154007810 154007822 POU3F1 JASPAR yes 70743815
chr5 154007810 154007822 POU3F2 JASPAR yes 70743816
chr5 154007810 154007823 POU3F3 JASPAR yes 67042609
chr5 154007810 154007823 POU3F3 JASPAR yes 70743817
chr5 154007811 154007823 POU2F1 JASPAR yes 67042610
chr5 154007811 154007823 POU2F1 JASPAR yes 70743818
chr5 154007812 154007821 POU3F4 JASPAR yes 67042611
chr5 154007812 154007821 POU5F1B JASPAR yes 67042612
chr5 154007812 154007821 POU3F4 JASPAR yes 70743819
chr5 154007812 154007821 POU5F1B JASPAR yes 70743820
chr5 154007817 154007821 YY1 TRANSFAC yes 67042613
chr5 154007817 154007821 YY1 TRANSFAC yes 70743821
chr5 154007821 154007827 JUN TRANSFAC yes 67042614
chr5 154007821 154007827 JUN TRANSFAC yes 70743822
chr5 154007827 154007838 FOXH1 JASPAR yes 67042615
chr5 154007827 154007838 FOXH1 JASPAR yes 70743823
chr5 154007828 154007834 ZNF354C JASPAR yes 67042616
chr5 154007828 154007834 ZNF354C JASPAR yes 70743824
chr5 154007834 154007840 JUN TRANSFAC yes 67042617
chr5 154007834 154007840 JUN TRANSFAC yes 70743825
chr5 154007853 154007859 MZF1 JASPAR yes 67042618
chr5 154007853 154007859 MZF1 JASPAR yes 70743826
chr5 154007878 154007884 ZNF354C JASPAR yes 67042619
chr5 154007878 154007884 ZNF354C JASPAR yes 70743827
chr5 154007920 154007935 PRDM1 JASPAR yes 67042620
chr5 154007920 154007935 PRDM1 JASPAR yes 70743828
SNP sites on vista49759[chr5:154007617-154007930]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 154007628 rs66793877 C A,T no 8631098
chr5 154007669 rs6892346 C A
CDX1 CDX2 ESR1 ESR2 HOXA10 HOXC10 HOXC11 HOXC12 NR2F1
8631099
chr5 154007705 rs556228663 T TG no 8631100
chr5 154007792 rs111370532 A G,T no 8631101
chr5 154007800 rs148752254 G A no 8631102
chr5 154007889 rs114895936 G A no 8631103
Genes possibly regulated by vista49759[chr5:154007617-154007930]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 154092462 154197167 + LARP1 ENSG00000155506.12 154092462 0.68 1.0 5911 15468
Expression level of Genes
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miRNAs possibly regulated by vista49759[chr5:154007617-154007930]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results