EnhancerDB
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  3. vista49761[chr5:154071115-154071211]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49761[chr5:154071115-154071211]
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Tissue distribution of vista49761
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Transcription factor that possibly regulate vista49761[chr5:154071115-154071211]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 154071153 154071162 SP1 TRANSFAC yes 67047982
chr5 154071153 154071162 SP1 TRANSFAC yes 70743907
chr5 154071153 154071172 PAX5 JASPAR yes 67047983
chr5 154071153 154071172 PAX5 JASPAR yes 70743908
chr5 154071154 154071160 SP1 TRANSFAC yes 67047984
chr5 154071154 154071160 SP1 TRANSFAC yes 70743909
chr5 154071154 154071164 SP1 JASPAR yes 67047985
chr5 154071154 154071164 SP1 JASPAR yes 70743910
chr5 154071155 154071162 SP1 TRANSFAC yes 67047986
chr5 154071155 154071162 SP1 TRANSFAC yes 70743911
chr5 154071156 154071161 SP1 TRANSFAC yes 67047987
chr5 154071156 154071161 SP1 TRANSFAC yes 70743912
chr5 154071156 154071162 SP1 TRANSFAC yes 67047988
chr5 154071156 154071162 SP1 TRANSFAC yes 70743913
chr5 154071165 154071177 TFAP2C JASPAR yes 67047989
chr5 154071165 154071177 TFAP2C JASPAR yes 70743914
chr5 154071180 154071197 RARA JASPAR yes 67047990
chr5 154071180 154071197 RARA JASPAR yes 70743915
chr5 154071187 154071197 RORA JASPAR yes 67047991
chr5 154071187 154071197 RORA JASPAR yes 70743916
chr5 154071188 154071199 ESRRA JASPAR yes 67047992
chr5 154071188 154071199 ESRRB JASPAR yes 67047993
chr5 154071188 154071199 ESRRA JASPAR yes 70743917
chr5 154071188 154071199 ESRRB JASPAR yes 70743918
chr5 154071189 154071204 NR2C2 JASPAR yes 67047994
chr5 154071189 154071204 NR2C2 JASPAR yes 70743919
chr5 154071190 154071198 NR4A2 JASPAR yes 67047995
chr5 154071190 154071198 NR4A2 JASPAR yes 70743920
chr5 154071192 154071196 ESR1 TRANSFAC yes 67047996
chr5 154071192 154071196 ESR1 TRANSFAC yes 70743921
chr5 154071207 154071217 TEAD1 JASPAR yes 67047997
chr5 154071207 154071217 TEAD4 JASPAR yes 67047998
chr5 154071207 154071217 TEAD1 JASPAR yes 70743922
chr5 154071207 154071217 TEAD4 JASPAR yes 70743923
chr5 154071207 154071219 TEAD1 JASPAR yes 67047999
chr5 154071207 154071219 TEAD1 JASPAR yes 70743924
chr5 154071208 154071216 TEAD3 JASPAR yes 67048000
chr5 154071208 154071216 TEAD3 JASPAR yes 70743925
SNP sites on vista49761[chr5:154071115-154071211]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 154071186 rs80198546 T G
RARA
8631617
chr5 154071208 rs75169312 T A
TEAD1 TEAD3 TEAD4
8631618
Genes possibly regulated by vista49761[chr5:154071115-154071211]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 154092462 154197167 + LARP1 ENSG00000155506.12 154092462 0.68 1.0 5911 78749
Expression level of Genes
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miRNAs possibly regulated by vista49761[chr5:154071115-154071211]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results