EnhancerDB
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  3. vista49796[chr5:156627228-156627541]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49796[chr5:156627228-156627541]
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Tissue distribution of vista49796
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Transcription factor that possibly regulate vista49796[chr5:156627228-156627541]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 156627223 156627236 SMAD2 JASPAR yes 67142948
chr5 156627223 156627236 SMAD2 JASPAR yes 70745394
chr5 156627228 156627238 MAX JASPAR yes 67142949
chr5 156627228 156627238 MAX JASPAR yes 70745395
chr5 156627228 156627240 HES5 JASPAR yes 67142950
chr5 156627228 156627240 HES7 JASPAR yes 67142951
chr5 156627228 156627240 PKNOX1 JASPAR yes 67142952
chr5 156627228 156627240 PKNOX2 JASPAR yes 67142953
chr5 156627228 156627240 TGIF1 JASPAR yes 67142954
chr5 156627228 156627240 TGIF2 JASPAR yes 67142955
chr5 156627228 156627240 HES5 JASPAR yes 70745396
chr5 156627228 156627240 HES7 JASPAR yes 70745397
chr5 156627228 156627240 PKNOX1 JASPAR yes 70745398
chr5 156627228 156627240 PKNOX2 JASPAR yes 70745399
chr5 156627228 156627240 TGIF1 JASPAR yes 70745400
chr5 156627228 156627240 TGIF2 JASPAR yes 70745401
chr5 156627229 156627239 CLOCK JASPAR yes 67142956
chr5 156627229 156627239 HEY1 JASPAR yes 67142957
chr5 156627229 156627239 HEY2 JASPAR yes 67142958
chr5 156627229 156627239 MAX JASPAR yes 67142959
chr5 156627229 156627239 CLOCK JASPAR yes 70745402
chr5 156627229 156627239 HEY1 JASPAR yes 70745403
chr5 156627229 156627239 HEY2 JASPAR yes 70745404
chr5 156627229 156627239 MAX JASPAR yes 70745405
chr5 156627230 156627240 MAX JASPAR yes 67142960
chr5 156627230 156627240 MAX JASPAR yes 70745406
chr5 156627231 156627236 MYC TRANSFAC yes 67142961
chr5 156627231 156627236 USF1 TRANSFAC yes 67142962
chr5 156627231 156627236 USF2 TRANSFAC yes 67142963
chr5 156627231 156627236 MYC TRANSFAC yes 70745407
chr5 156627231 156627236 USF1 TRANSFAC yes 70745408
chr5 156627231 156627236 USF2 TRANSFAC yes 70745409
chr5 156627270 156627276 YY1 JASPAR yes 67142964
chr5 156627270 156627276 YY1 JASPAR yes 70745410
chr5 156627318 156627322 H4TF2 TRANSFAC yes 67142965
chr5 156627318 156627322 H4TF2 TRANSFAC yes 70745411
chr5 156627355 156627358 MYB TRANSFAC yes 67142966
chr5 156627355 156627358 MYB TRANSFAC yes 70745412
chr5 156627369 156627386 NR3C1 JASPAR yes 67142967
chr5 156627369 156627386 NR3C2 JASPAR yes 67142968
chr5 156627369 156627386 NR3C1 JASPAR yes 70745413
chr5 156627369 156627386 NR3C2 JASPAR yes 70745414
chr5 156627371 156627386 AR JASPAR yes 67142969
chr5 156627371 156627386 AR JASPAR yes 70745415
chr5 156627383 156627390 E2F1 TRANSFAC yes 67142970
chr5 156627383 156627390 E2F1 TRANSFAC yes 70745416
chr5 156627386 156627401 PRDM1 JASPAR yes 67142971
chr5 156627386 156627401 PRDM1 JASPAR yes 70745417
chr5 156627392 156627407 PRDM1 JASPAR yes 67142972
chr5 156627392 156627407 PRDM1 JASPAR yes 70745418
chr5 156627402 156627422 RREB1 JASPAR yes 67142973
chr5 156627402 156627422 RREB1 JASPAR yes 70745419
chr5 156627408 156627423 RUNX2 JASPAR yes 67142974
chr5 156627408 156627423 RUNX2 JASPAR yes 70745420
chr5 156627411 156627422 RUNX1 JASPAR yes 67142975
chr5 156627411 156627422 RUNX1 JASPAR yes 70745421
chr5 156627412 156627422 RUNX3 JASPAR yes 67142976
chr5 156627412 156627422 RUNX3 JASPAR yes 70745422
chr5 156627413 156627422 RUNX2 JASPAR yes 67142977
chr5 156627413 156627422 RUNX2 JASPAR yes 70745423
chr5 156627413 156627432 RFX2 JASPAR yes 67142978
chr5 156627413 156627432 RFX2 JASPAR yes 70745424
chr5 156627417 156627433 RFX5 JASPAR yes 67142979
chr5 156627417 156627433 RFX5 JASPAR yes 70745425
chr5 156627420 156627425 ETS2 TRANSFAC yes 67142980
chr5 156627420 156627425 ETS2 TRANSFAC yes 70745426
chr5 156627435 156627450 SOX21 JASPAR yes 67142981
chr5 156627435 156627450 SOX21 JASPAR yes 70745427
chr5 156627435 156627451 SOX4 JASPAR yes 67142982
chr5 156627435 156627451 SOX4 JASPAR yes 70745428
chr5 156627443 156627447 YY1 TRANSFAC yes 67142983
chr5 156627443 156627447 YY1 TRANSFAC yes 70745429
chr5 156627446 156627461 MEF2C JASPAR yes 67142984
chr5 156627446 156627461 MEF2C JASPAR yes 70745430
chr5 156627447 156627462 MEF2A JASPAR yes 67142985
chr5 156627447 156627462 MEF2A JASPAR yes 70745431
chr5 156627459 156627469 MYF6 JASPAR yes 67142986
chr5 156627459 156627469 MYF6 JASPAR yes 70745432
chr5 156627461 156627466 MYC TRANSFAC yes 67142987
chr5 156627461 156627466 MYC TRANSFAC yes 70745433
chr5 156627491 156627506 STAT1 JASPAR yes 67142988
chr5 156627491 156627506 STAT1 JASPAR yes 70745434
chr5 156627493 156627504 STAT1 JASPAR yes 67142989
chr5 156627493 156627504 STAT1 JASPAR yes 70745435
chr5 156627532 156627546 GLIS2 JASPAR yes 67142990
chr5 156627532 156627546 GLIS3 JASPAR yes 67142991
chr5 156627532 156627546 GLIS2 JASPAR yes 70745436
chr5 156627532 156627546 GLIS3 JASPAR yes 70745437
chr5 156627532 156627547 ZIC4 JASPAR yes 67142992
chr5 156627532 156627547 ZIC4 JASPAR yes 70745438
chr5 156627533 156627547 EBF1 JASPAR yes 67142993
chr5 156627533 156627547 EBF1 JASPAR yes 70745439
SNP sites on vista49796[chr5:156627228-156627541]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 156627277 rs2067343 A AT no 8640251
chr5 156627319 rs140249004 G T
H4TF2
8640252
chr5 156627333 rs150351605 C T no 8640253
chr5 156627357 rs4704739 A T
MYB
8640254
chr5 156627383 rs374694236 A G
AR E2F1 NR3C1 NR3C2
8640255
chr5 156627387 rs6873969 G A
E2F1 PRDM1
8640256
chr5 156627516 rs145742246 C T no 8640257
chr5 156627517 rs114982048 G A no 8640258
chr5 156627522 rs141668891 C T no 8640259
chr5 156627541 rs72807052 G A
EBF1 GLIS2 GLIS3 ZIC4
8640260
Genes possibly regulated by vista49796[chr5:156627228-156627541]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 156512843 156569880 - HAVCR2 ENSG00000135077.4 156569880 0.87 0.99 5920 42652
chr5 156564423 156586030 - MED7 ENSG00000155868.7 156586030 0.7 0.99 5921 58802
chr5 156569944 156682201 + ITK ENSG00000113263.8 156569944 0.97 0.97 5922 42716
chr5 156588857 156593275 - FAM71B ENSG00000170613.4 156593275 0.99 1.0 5923 66047
chr5 156693089 156822606 + CYFIP2 ENSG00000055163.14 156693089 0.87 1.0 5924 34452
Expression level of Genes
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miRNAs possibly regulated by vista49796[chr5:156627228-156627541]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results