EnhancerDB
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  3. vista49807[chr5:156897739-156898102]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49807[chr5:156897739-156898102]
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Tissue distribution of vista49807
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Transcription factor that possibly regulate vista49807[chr5:156897739-156898102]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 156897745 156897760 MEF2A JASPAR yes 70746019
chr5 156897749 156897753 YY1 TRANSFAC yes 70746020
chr5 156897756 156897771 HNF1A JASPAR yes 70746021
chr5 156897757 156897770 HNF1B JASPAR yes 70746022
chr5 156897758 156897768 PAX3 JASPAR yes 70746023
chr5 156897758 156897768 PAX7 JASPAR yes 70746024
chr5 156897780 156897795 JUND JASPAR yes 70746025
chr5 156897781 156897794 JUN JASPAR yes 70746026
chr5 156897782 156897800 SRF JASPAR yes 70746027
chr5 156897783 156897795 SRF JASPAR yes 70746028
chr5 156897788 156897792 YY1 TRANSFAC yes 70746029
chr5 156897805 156897810 SP1 TRANSFAC yes 70746030
chr5 156897807 156897821 TLX1 JASPAR yes 70746031
chr5 156897815 156897834 CTCF JASPAR yes 70746032
chr5 156897827 156897832 GATA1 TRANSFAC yes 70746033
chr5 156897832 156897836 TEAD2 TRANSFAC yes 70746034
chr5 156897842 156897855 SMAD2 JASPAR yes 70746035
chr5 156897846 156897865 CTCF JASPAR yes 70746036
chr5 156897848 156897860 TAL1 JASPAR yes 70746037
chr5 156897850 156897856 YY1 JASPAR yes 70746038
chr5 156897850 156897860 NEUROG2 JASPAR yes 70746039
chr5 156897850 156897862 TAL1 JASPAR yes 70746040
chr5 156897858 156897864 NFIC JASPAR yes 70746041
chr5 156897873 156897880 PEA3 TRANSFAC yes 70746042
chr5 156897888 156897893 ETS2 TRANSFAC yes 70746043
chr5 156897904 156897922 NR3C1 JASPAR yes 70746044
chr5 156897907 156897923 SOX8 JASPAR yes 70746045
chr5 156897909 156897913 YY1 TRANSFAC yes 70746046
chr5 156897913 156897922 NKX2-8 JASPAR yes 70746047
chr5 156897943 156897964 IRF1 JASPAR yes 70746048
chr5 156897946 156897960 STAT1 JASPAR yes 70746049
chr5 156897952 156897970 SRF JASPAR yes 70746050
chr5 156897972 156897981 ZEB1 JASPAR yes 70746051
chr5 156897975 156897980 USF2 TRANSFAC yes 70746052
chr5 156897981 156897985 YY1 TRANSFAC yes 70746053
chr5 156898007 156898010 MYB TRANSFAC yes 70746054
chr5 156898017 156898023 HiNF-A TRANSFAC yes 70746055
chr5 156898022 156898037 STAT2 JASPAR yes 70746056
chr5 156898024 156898038 IRF8 JASPAR yes 70746057
chr5 156898039 156898043 YY1 TRANSFAC yes 70746058
chr5 156898059 156898080 ZNF263 JASPAR yes 70746059
chr5 156898069 156898073 LFA1 TRANSFAC yes 70746060
chr5 156898076 156898081 ETS2 TRANSFAC yes 70746061
chr5 156898088 156898092 YY1 TRANSFAC yes 70746062
SNP sites on vista49807[chr5:156897739-156898102]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 156897786 rs73309965 C T
JUN JUND SRF
8641614
chr5 156897857 rs79757770 T G
CTCF NEUROG2 TAL1
8641615
chr5 156897898 rs576973283 G A no 8641616
chr5 156897936 rs114312788 C T no 8641617
chr5 156897946 rs187943076 A G
IRF1 STAT1
8641618
chr5 156898095 rs561664725 G A no 8641619
Genes possibly regulated by vista49807[chr5:156897739-156898102]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 156887027 156901725 + NIPAL4 ENSG00000172548.10 156887027 0.91 0.98 5927 89288
Expression level of Genes
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miRNAs possibly regulated by vista49807[chr5:156897739-156898102]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results