EnhancerDB
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  3. vista49827[chr5:157038675-157038947]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49827[chr5:157038675-157038947]
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Tissue distribution of vista49827
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Transcription factor that possibly regulate vista49827[chr5:157038675-157038947]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 157038492 157039289 IKZF1 UCSC Txn Factor no Conserved 108537163
chr5 157038536 157039018 RUNX3 UCSC Txn Factor no Conserved 108537164
chr5 157038537 157039102 NFIC UCSC Txn Factor no Conserved 108537165
chr5 157038562 157039048 RELA UCSC Txn Factor no Conserved 108537166
chr5 157038576 157039061 FOXM1 UCSC Txn Factor no Conserved 108537167
chr5 157038593 157039032 ATF2 UCSC Txn Factor no Conserved 108537168
chr5 157038650 157038966 SPI1 UCSC Txn Factor no Conserved 108537169
chr5 157038691 157039006 NFATC1 UCSC Txn Factor no Conserved 108537170
chr5 157038702 157038959 BCL11A UCSC Txn Factor no Conserved 108537171
chr5 157038702 157038985 BATF UCSC Txn Factor no Conserved 108537172
chr5 157038670 157038679 SRY JASPAR yes 67167982
chr5 157038670 157038679 SRY JASPAR yes 70747193
chr5 157038681 157038693 IRF1 JASPAR yes 67167983
chr5 157038681 157038693 IRF1 JASPAR yes 70747194
chr5 157038683 157038696 SCRT2 JASPAR yes 67167984
chr5 157038683 157038696 SCRT2 JASPAR yes 70747195
chr5 157038686 157038698 NHLH1 JASPAR yes 67167985
chr5 157038686 157038698 NHLH1 JASPAR yes 70747196
chr5 157038687 157038697 FIGLA JASPAR yes 67167986
chr5 157038687 157038697 MSC JASPAR yes 67167987
chr5 157038687 157038697 MYF6 JASPAR yes 67167988
chr5 157038687 157038697 NHLH1 JASPAR yes 67167989
chr5 157038687 157038697 TFAP4 JASPAR yes 67167990
chr5 157038687 157038697 FIGLA JASPAR yes 70747197
chr5 157038687 157038697 MSC JASPAR yes 70747198
chr5 157038687 157038697 MYF6 JASPAR yes 70747199
chr5 157038687 157038697 NHLH1 JASPAR yes 70747200
chr5 157038687 157038697 TFAP4 JASPAR yes 70747201
chr5 157038687 157038699 TAL1 JASPAR yes 67167991
chr5 157038687 157038699 TAL1 JASPAR yes 70747202
chr5 157038688 157038701 SCRT2 JASPAR yes 67167992
chr5 157038688 157038701 SCRT2 JASPAR yes 70747203
chr5 157038719 157038725 SOX10 JASPAR yes 67167993
chr5 157038719 157038725 SOX10 JASPAR yes 70747204
chr5 157038720 157038731 ESRRA JASPAR yes 67167994
chr5 157038720 157038731 ESRRB JASPAR yes 67167995
chr5 157038720 157038731 ESRRA JASPAR yes 70747205
chr5 157038720 157038731 ESRRB JASPAR yes 70747206
chr5 157038734 157038743 JDP2 JASPAR yes 67167996
chr5 157038734 157038743 JDP2 JASPAR yes 70747207
chr5 157038747 157038752 TFAP2A TRANSFAC yes 67167997
chr5 157038747 157038752 TFAP2A TRANSFAC yes 70747208
chr5 157038747 157038753 MZF1 JASPAR yes 67167998
chr5 157038747 157038753 MZF1 JASPAR yes 70747209
chr5 157038748 157038759 NFKB1 JASPAR yes 67167999
chr5 157038748 157038759 NFKB1 JASPAR yes 70747210
chr5 157038749 157038759 RELA JASPAR yes 67168000
chr5 157038749 157038759 RELA JASPAR yes 70747211
chr5 157038795 157038799 YY1 TRANSFAC yes 67168001
chr5 157038795 157038799 YY1 TRANSFAC yes 70747212
chr5 157038796 157038811 HNF1A JASPAR yes 67168002
chr5 157038796 157038811 HNF1A JASPAR yes 70747213
chr5 157038797 157038810 HNF1B JASPAR yes 67168003
chr5 157038797 157038810 HNF1B JASPAR yes 70747214
chr5 157038803 157038807 YY1 TRANSFAC yes 67168004
chr5 157038803 157038807 YY1 TRANSFAC yes 70747215
chr5 157038815 157038829 SPI1 JASPAR yes 67168005
chr5 157038815 157038829 SPI1 JASPAR yes 70747216
chr5 157038838 157038842 YY1 TRANSFAC yes 67168006
chr5 157038838 157038842 YY1 TRANSFAC yes 70747217
chr5 157038848 157038858 RELA JASPAR yes 67168007
chr5 157038848 157038858 REL JASPAR yes 67168008
chr5 157038848 157038858 RELA JASPAR yes 70747218
chr5 157038848 157038858 REL JASPAR yes 70747219
chr5 157038848 157038859 NFKB1 JASPAR yes 67168009
chr5 157038848 157038859 NFKB1 JASPAR yes 70747220
chr5 157038879 157038883 NFE TRANSFAC yes 67168010
chr5 157038879 157038883 NFE TRANSFAC yes 70747221
chr5 157038921 157038935 PAX6 JASPAR yes 67168011
chr5 157038921 157038935 PAX6 JASPAR yes 70747222
chr5 157038923 157038937 PAX6 JASPAR yes 67168012
chr5 157038923 157038937 PAX6 JASPAR yes 70747223
chr5 157038942 157038958 GLIS1 JASPAR yes 67168013
chr5 157038942 157038958 GLIS1 JASPAR yes 70747224
SNP sites on vista49827[chr5:157038675-157038947]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 157038688 rs74764156 C T
ATF2 FIGLA FOXM1 IKZF1 IRF1 MSC MYF6 NFIC NHLH1 RELA RUNX3 SCRT2 SPI1 TAL1 TFAP4
8642866
chr5 157038694 rs543091741 T C
ATF2 FIGLA FOXM1 IKZF1 MSC MYF6 NFATC1 NFIC NHLH1 RELA RUNX3 SCRT2 SPI1 TAL1 TFAP4
8642867
chr5 157038795 rs142044512 A G
ATF2 BATF BCL11A FOXM1 IKZF1 NFATC1 NFIC RELA RUNX3 SPI1 YY1
8642868
chr5 157038911 rs531233901 T C
ATF2 BATF BCL11A FOXM1 IKZF1 NFATC1 NFIC RELA RUNX3 SPI1
8642869
chr5 157038929 rs78496786 G A,T
ATF2 BATF BCL11A FOXM1 IKZF1 NFATC1 NFIC PAX6 RELA RUNX3 SPI1
8642870
Genes possibly regulated by vista49827[chr5:157038675-157038947]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 156822542 157002783 - ADAM19 ENSG00000135074.11 157002783 0.82 1.0 5926 64108
chr5 157052687 157098488 - SOX30 ENSG00000039600.6 157098488 0.85 1.0 5928 40459
chr5 157098561 157107151 + C5orf52 ENSG00000187658.6 157098561 1.0 0.99 5929 40386
Expression level of Genes
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miRNAs possibly regulated by vista49827[chr5:157038675-157038947]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results