EnhancerDB
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  3. vista4988[chr1:212291571-212291809]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4988[chr1:212291571-212291809]
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Tissue distribution of vista4988
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Transcription factor that possibly regulate vista4988[chr1:212291571-212291809]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212291570 212291576 TCF4 TRANSFAC yes 35099320
chr1 212291570 212291576 TCF4 TRANSFAC yes 118452263
chr1 212291571 212291589 MAFF JASPAR yes 35099321
chr1 212291571 212291589 MAFF JASPAR yes 118452264
chr1 212291572 212291587 MAFK JASPAR yes 35099322
chr1 212291572 212291587 MAFK JASPAR yes 118452265
chr1 212291576 212291587 NRL JASPAR yes 35099323
chr1 212291576 212291587 NRL JASPAR yes 118452266
chr1 212291615 212291619 TEAD2 TRANSFAC yes 35099324
chr1 212291615 212291619 TEAD2 TRANSFAC yes 118452267
chr1 212291615 212291620 TBP TRANSFAC yes 35099325
chr1 212291615 212291620 TBP TRANSFAC yes 118452268
chr1 212291615 212291621 TMF TRANSFAC yes 35099326
chr1 212291615 212291621 TMF TRANSFAC yes 118452269
chr1 212291653 212291657 NFE TRANSFAC yes 35099327
chr1 212291653 212291657 NFE TRANSFAC yes 118452270
chr1 212291653 212291658 GATA1 TRANSFAC yes 35099328
chr1 212291653 212291658 GATA1 TRANSFAC yes 118452271
chr1 212291653 212291659 GATA3 JASPAR yes 35099329
chr1 212291653 212291659 GATA3 JASPAR yes 118452272
chr1 212291665 212291678 NR2F1 JASPAR yes 35099330
chr1 212291665 212291678 NR2F1 JASPAR yes 118452273
chr1 212291668 212291676 NR4A2 JASPAR yes 35099331
chr1 212291668 212291676 NR4A2 JASPAR yes 118452274
chr1 212291673 212291686 POU3F3 JASPAR yes 35099332
chr1 212291673 212291686 POU3F3 JASPAR yes 118452275
chr1 212291674 212291686 POU3F1 JASPAR yes 35099333
chr1 212291674 212291686 POU3F1 JASPAR yes 118452276
chr1 212291689 212291693 YY1 TRANSFAC yes 35099334
chr1 212291689 212291693 YY1 TRANSFAC yes 118452277
chr1 212291721 212291732 ETV2 JASPAR yes 35099335
chr1 212291721 212291732 ETV2 JASPAR yes 118452278
chr1 212291735 212291738 MYB TRANSFAC yes 35099336
chr1 212291735 212291738 MYB TRANSFAC yes 118452279
chr1 212291740 212291755 PRDM1 JASPAR yes 35099337
chr1 212291740 212291755 PRDM1 JASPAR yes 118452280
chr1 212291761 212291771 GSC2 JASPAR yes 35099338
chr1 212291761 212291771 GSC2 JASPAR yes 118452281
chr1 212291762 212291770 OTX1 JASPAR yes 35099339
chr1 212291762 212291770 OTX2 JASPAR yes 35099340
chr1 212291762 212291770 OTX1 JASPAR yes 118452282
chr1 212291762 212291770 OTX2 JASPAR yes 118452283
chr1 212291767 212291778 PHOX2A JASPAR yes 35099341
chr1 212291767 212291778 PROP1 JASPAR yes 35099342
chr1 212291767 212291778 PHOX2A JASPAR yes 118452284
chr1 212291767 212291778 PROP1 JASPAR yes 118452285
chr1 212291775 212291791 SRF JASPAR yes 35099343
chr1 212291775 212291791 SRF JASPAR yes 118452286
chr1 212291782 212291793 NFIL3 JASPAR yes 35099344
chr1 212291782 212291793 NFIL3 JASPAR yes 118452287
chr1 212291797 212291809 HES5 JASPAR yes 35099345
chr1 212291797 212291809 HES7 JASPAR yes 35099346
chr1 212291797 212291809 PKNOX2 JASPAR yes 35099347
chr1 212291797 212291809 HES5 JASPAR yes 118452288
chr1 212291797 212291809 HES7 JASPAR yes 118452289
chr1 212291797 212291809 PKNOX2 JASPAR yes 118452290
SNP sites on vista4988[chr1:212291571-212291809]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212291602 rs150439972 TAAG T no 920505
chr1 212291602 rs35559953 TAAG T no 920506
chr1 212291681 rs79924620 A T
POU3F1 POU3F3
920507
chr1 212291742 rs74140405 T C
PRDM1
920508
Genes possibly regulated by vista4988[chr1:212291571-212291809]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212113741 212208884 - INTS7 ENSG00000143493.8 212208884 0.74 0.99 1823 17313
chr1 212208919 212280742 + DTL ENSG00000143476.13 212208919 0.95 0.99 1824 17348
Expression level of Genes
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miRNAs possibly regulated by vista4988[chr1:212291571-212291809]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results