EnhancerDB
  1. Home
  2. Enhancers
  3. vista49901[chr5:159402452-159402764]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49901[chr5:159402452-159402764]
Back to top
Tissue distribution of vista49901
Back to top
Transcription factor that possibly regulate vista49901[chr5:159402452-159402764]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 159402478 159402904 CTCF UCSC Txn Factor no Conserved 108537252
chr5 159402578 159402858 RAD21 UCSC Txn Factor no Conserved 108537253
chr5 159402451 159402457 SOX10 JASPAR yes 67331087
chr5 159402451 159402457 SOX10 JASPAR yes 70750796
chr5 159402475 159402490 FOXA1 JASPAR yes 67331088
chr5 159402475 159402490 FOXA1 JASPAR yes 70750797
chr5 159402477 159402488 FOXP2 JASPAR yes 67331089
chr5 159402477 159402488 FOXP2 JASPAR yes 70750798
chr5 159402478 159402482 TEAD2 TRANSFAC yes 67331090
chr5 159402478 159402482 TEAD2 TRANSFAC yes 70750799
chr5 159402478 159402483 TBP TRANSFAC yes 67331091
chr5 159402478 159402483 TBP TRANSFAC yes 70750800
chr5 159402479 159402487 FOXG1 JASPAR yes 67331092
chr5 159402479 159402487 FOXG1 JASPAR yes 70750801
chr5 159402488 159402500 POU2F1 JASPAR yes 67331093
chr5 159402488 159402500 POU2F1 JASPAR yes 70750802
chr5 159402488 159402501 POU3F3 JASPAR yes 67331094
chr5 159402488 159402501 POU3F3 JASPAR yes 70750803
chr5 159402488 159402502 POU1F1 JASPAR yes 67331095
chr5 159402488 159402502 POU1F1 JASPAR yes 70750804
chr5 159402489 159402501 POU3F1 JASPAR yes 67331096
chr5 159402489 159402501 POU3F2 JASPAR yes 67331097
chr5 159402489 159402501 POU3F1 JASPAR yes 70750805
chr5 159402489 159402501 POU3F2 JASPAR yes 70750806
chr5 159402489 159402502 POU2F2 JASPAR yes 67331098
chr5 159402489 159402502 POU2F2 JASPAR yes 70750807
chr5 159402490 159402499 POU3F4 JASPAR yes 67331099
chr5 159402490 159402499 POU5F1B JASPAR yes 67331100
chr5 159402490 159402499 POU3F4 JASPAR yes 70750808
chr5 159402490 159402499 POU5F1B JASPAR yes 70750809
chr5 159402491 159402498 POU2F1 TRANSFAC yes 67331101
chr5 159402491 159402498 POU2F2 TRANSFAC yes 67331102
chr5 159402491 159402498 POU2F1 TRANSFAC yes 70750810
chr5 159402491 159402498 POU2F2 TRANSFAC yes 70750811
chr5 159402503 159402507 LFA1 TRANSFAC yes 67331103
chr5 159402503 159402507 LFA1 TRANSFAC yes 70750812
chr5 159402517 159402521 TEAD2 TRANSFAC yes 67331104
chr5 159402517 159402521 TEAD2 TRANSFAC yes 70750813
chr5 159402523 159402538 HNF4A JASPAR yes 67331105
chr5 159402523 159402538 HNF4A JASPAR yes 70750814
chr5 159402524 159402538 NR2F1 JASPAR yes 67331106
chr5 159402524 159402538 NR2F1 JASPAR yes 70750815
chr5 159402524 159402539 HNF4G JASPAR yes 67331107
chr5 159402524 159402539 HNF4G JASPAR yes 70750816
chr5 159402532 159402537 GATA2 JASPAR yes 67331108
chr5 159402532 159402537 GATA2 JASPAR yes 70750817
chr5 159402535 159402539 YY1 TRANSFAC yes 67331109
chr5 159402535 159402539 YY1 TRANSFAC yes 70750818
chr5 159402540 159402555 RUNX2 JASPAR yes 67331110
chr5 159402540 159402555 RUNX2 JASPAR yes 70750819
chr5 159402561 159402565 YY1 TRANSFAC yes 67331111
chr5 159402561 159402565 YY1 TRANSFAC yes 70750820
chr5 159402562 159402570 FEV JASPAR yes 67331112
chr5 159402562 159402570 FEV JASPAR yes 70750821
chr5 159402581 159402596 JUND JASPAR yes 67331113
chr5 159402581 159402596 JUND JASPAR yes 70750822
chr5 159402582 159402595 JUN JASPAR yes 67331114
chr5 159402582 159402595 JUN JASPAR yes 70750823
chr5 159402584 159402599 JUND JASPAR yes 67331115
chr5 159402584 159402599 JUND JASPAR yes 70750824
chr5 159402596 159402600 YY1 TRANSFAC yes 67331116
chr5 159402596 159402600 YY1 TRANSFAC yes 70750825
chr5 159402608 159402618 RORA JASPAR yes 67331117
chr5 159402608 159402618 RORA JASPAR yes 70750826
chr5 159402611 159402619 NR4A2 JASPAR yes 67331118
chr5 159402611 159402619 NR4A2 JASPAR yes 70750827
chr5 159402612 159402627 ESR2 JASPAR yes 67331119
chr5 159402612 159402627 ESR2 JASPAR yes 70750828
chr5 159402613 159402617 ESR1 TRANSFAC yes 67331120
chr5 159402613 159402617 ESR1 TRANSFAC yes 70750829
chr5 159402634 159402639 SP1 TRANSFAC yes 67331121
chr5 159402634 159402639 SP1 TRANSFAC yes 70750830
chr5 159402656 159402667 STAT3 JASPAR yes 67331122
chr5 159402656 159402667 STAT3 JASPAR yes 70750831
chr5 159402664 159402669 ETS2 TRANSFAC yes 67331123
chr5 159402664 159402669 ETS2 TRANSFAC yes 70750832
chr5 159402691 159402710 CTCF JASPAR yes 67331124
chr5 159402691 159402710 CTCF JASPAR yes 70750833
chr5 159402693 159402706 TFAP2B JASPAR yes 67331125
chr5 159402693 159402706 TFAP2C JASPAR yes 67331126
chr5 159402693 159402706 TFAP2B JASPAR yes 70750834
chr5 159402693 159402706 TFAP2C JASPAR yes 70750835
chr5 159402702 159402716 NR2F1 JASPAR yes 67331127
chr5 159402702 159402716 NR2F1 JASPAR yes 70750836
chr5 159402711 159402715 H4TF2 TRANSFAC yes 67331128
chr5 159402711 159402715 H4TF2 TRANSFAC yes 70750837
chr5 159402740 159402744 YY1 TRANSFAC yes 67331129
chr5 159402740 159402744 YY1 TRANSFAC yes 70750838
chr5 159402748 159402759 NFKB1 JASPAR yes 67331130
chr5 159402748 159402759 NFKB1 JASPAR yes 70750839
chr5 159402761 159402774 ELF3 JASPAR yes 67331131
chr5 159402761 159402774 ELF3 JASPAR yes 70750840
chr5 159402762 159402773 ELF5 JASPAR yes 67331132
chr5 159402762 159402773 ELF5 JASPAR yes 70750841
chr5 159402762 159402774 EHF JASPAR yes 67331133
chr5 159402762 159402774 ELF1 JASPAR yes 67331134
chr5 159402762 159402774 ELF4 JASPAR yes 67331135
chr5 159402762 159402774 EHF JASPAR yes 70750842
chr5 159402762 159402774 ELF1 JASPAR yes 70750843
chr5 159402762 159402774 ELF4 JASPAR yes 70750844
chr5 159402762 159402775 ELF1 JASPAR yes 67331136
chr5 159402762 159402775 ELF1 JASPAR yes 70750845
chr5 159402763 159402770 SPI1 JASPAR yes 67331137
chr5 159402763 159402770 SPI1 JASPAR yes 70750846
chr5 159402763 159402771 FEV JASPAR yes 67331138
chr5 159402763 159402771 FEV JASPAR yes 70750847
SNP sites on vista49901[chr5:159402452-159402764]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 159402455 rs567404242 A G
SOX10
8656869
chr5 159402589 rs148767499 A G
CTCF JUN JUND RAD21
8656870
chr5 159402605 rs58552301 G C
CTCF RAD21
8656871
chr5 159402695 rs10214093 C A
CTCF RAD21 TFAP2B TFAP2C
8656872
Genes possibly regulated by vista49901[chr5:159402452-159402764]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 159343790 159399551 + ADRA1B ENSG00000170214.3 159343790 0.91 0.86 5938 41338
chr5 159436120 159492550 + TTC1 ENSG00000113312.6 159436120 0.53 0.99 5939 66644
Expression level of Genes
Back to top
miRNAs possibly regulated by vista49901[chr5:159402452-159402764]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results