EnhancerDB
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  3. vista49904[chr5:159434366-159434726]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49904[chr5:159434366-159434726]
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Tissue distribution of vista49904
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Transcription factor that possibly regulate vista49904[chr5:159434366-159434726]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 159434366 159434381 FOXP1 JASPAR yes 70750902
chr5 159434366 159434387 IRF1 JASPAR yes 70750903
chr5 159434367 159434373 TBP TRANSFAC yes 70750904
chr5 159434367 159434382 FOXP1 JASPAR yes 70750905
chr5 159434370 159434385 PRDM1 JASPAR yes 70750906
chr5 159434370 159434385 STAT2 JASPAR yes 70750907
chr5 159434372 159434393 IRF1 JASPAR yes 70750908
chr5 159434378 159434399 IRF1 JASPAR yes 70750909
chr5 159434404 159434411 NKX3-1 JASPAR yes 70750910
chr5 159434408 159434411 MYB TRANSFAC yes 70750911
chr5 159434408 159434424 E2F2 JASPAR yes 70750912
chr5 159434462 159434472 MEOX2 JASPAR yes 70750913
chr5 159434464 159434474 PAX7 JASPAR yes 70750914
chr5 159434464 159434475 PHOX2A JASPAR yes 70750915
chr5 159434464 159434475 PROP1 JASPAR yes 70750916
chr5 159434486 159434490 YY1 TRANSFAC yes 70750917
chr5 159434493 159434507 ZIC1 JASPAR yes 70750918
chr5 159434501 159434522 MAFG JASPAR yes 70750919
chr5 159434547 159434562 FOXP1 JASPAR yes 70750920
chr5 159434548 159434557 SRY JASPAR yes 70750921
chr5 159434550 159434558 FOXO3 JASPAR yes 70750922
chr5 159434573 159434578 ETS2 TRANSFAC yes 70750923
chr5 159434589 159434592 MYB TRANSFAC yes 70750924
chr5 159434597 159434607 HOXA13 JASPAR yes 70750925
chr5 159434597 159434607 HOXB13 JASPAR yes 70750926
chr5 159434597 159434607 HOXD13 JASPAR yes 70750927
chr5 159434598 159434607 CDX1 JASPAR yes 70750928
chr5 159434598 159434609 CDX2 JASPAR yes 70750929
chr5 159434608 159434624 POU4F2 JASPAR yes 70750930
chr5 159434608 159434624 POU4F3 JASPAR yes 70750931
chr5 159434610 159434624 POU4F1 JASPAR yes 70750932
chr5 159434610 159434625 HNF1A JASPAR yes 70750933
chr5 159434611 159434624 HNF1B JASPAR yes 70750934
chr5 159434612 159434619 NKX3-1 JASPAR yes 70750935
chr5 159434612 159434628 POU4F2 JASPAR yes 70750936
chr5 159434613 159434628 FOXA1 JASPAR yes 70750937
chr5 159434614 159434626 FOXI1 JASPAR yes 70750938
chr5 159434614 159434628 POU4F1 JASPAR yes 70750939
chr5 159434615 159434627 FOXC2 JASPAR yes 70750940
chr5 159434616 159434627 FOXB1 JASPAR yes 70750941
chr5 159434616 159434627 FOXC1 JASPAR yes 70750942
chr5 159434616 159434627 PROP1 JASPAR yes 70750943
chr5 159434617 159434621 YY1 TRANSFAC yes 70750944
chr5 159434621 159434625 YY1 TRANSFAC yes 70750945
chr5 159434626 159434640 NR2F1 JASPAR yes 70750946
chr5 159434643 159434653 NFATC3 JASPAR yes 70750947
chr5 159434649 159434653 YY1 TRANSFAC yes 70750948
chr5 159434659 159434670 PHOX2A JASPAR yes 70750949
chr5 159434659 159434670 PROP1 JASPAR yes 70750950
chr5 159434661 159434666 MYB TRANSFAC yes 70750951
chr5 159434668 159434671 MYB TRANSFAC yes 70750952
chr5 159434675 159434684 NKX3-2 JASPAR yes 70750953
chr5 159434675 159434685 NKX2-3 JASPAR yes 70750954
chr5 159434676 159434684 ISL2 JASPAR yes 70750955
chr5 159434676 159434685 NKX2-8 JASPAR yes 70750956
chr5 159434691 159434694 MYB TRANSFAC yes 70750957
chr5 159434695 159434699 YY1 TRANSFAC yes 70750958
chr5 159434696 159434717 IRF1 JASPAR yes 70750959
chr5 159434697 159434718 IRF1 JASPAR yes 70750960
chr5 159434698 159434713 STAT2 JASPAR yes 70750961
chr5 159434698 159434719 IRF1 JASPAR yes 70750962
chr5 159434699 159434720 IRF1 JASPAR yes 70750963
chr5 159434700 159434721 IRF1 JASPAR yes 70750964
chr5 159434701 159434716 FOXP1 JASPAR yes 70750965
chr5 159434701 159434722 IRF1 JASPAR yes 70750966
chr5 159434702 159434717 FOXP1 JASPAR yes 70750967
chr5 159434702 159434723 IRF1 JASPAR yes 70750968
chr5 159434703 159434718 FOXP1 JASPAR yes 70750969
chr5 159434703 159434724 IRF1 JASPAR yes 70750970
chr5 159434704 159434719 FOXP1 JASPAR yes 70750971
chr5 159434704 159434725 IRF1 JASPAR yes 70750972
chr5 159434705 159434720 FOXP1 JASPAR yes 70750973
chr5 159434706 159434721 FOXP1 JASPAR yes 70750974
chr5 159434707 159434722 FOXP1 JASPAR yes 70750975
chr5 159434708 159434723 FOXP1 JASPAR yes 70750976
chr5 159434709 159434724 FOXP1 JASPAR yes 70750977
chr5 159434710 159434725 FOXP1 JASPAR yes 70750978
chr5 159434711 159434726 FOXP1 JASPAR yes 70750979
SNP sites on vista49904[chr5:159434366-159434726]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 159434389 rs140520846 A T
IRF1
8657063
chr5 159434404 rs540184401 A AT
NKX3-1
8657064
chr5 159434500 rs74813139 A G
ZIC1
8657065
chr5 159434588 rs138166060 C T no 8657066
chr5 159434589 rs76408868 G A
MYB
8657067
Genes possibly regulated by vista49904[chr5:159434366-159434726]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 159343790 159399551 + ADRA1B ENSG00000170214.3 159343790 0.91 0.86 5938 9424
chr5 159436120 159492550 + TTC1 ENSG00000113312.6 159436120 0.53 0.99 5939 98606
Expression level of Genes
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miRNAs possibly regulated by vista49904[chr5:159434366-159434726]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results