EnhancerDB
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  3. vista49909[chr5:159533500-159533764]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49909[chr5:159533500-159533764]
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Tissue distribution of vista49909
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Transcription factor that possibly regulate vista49909[chr5:159533500-159533764]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 159533491 159533507 POU4F2 JASPAR yes 67340906
chr5 159533491 159533507 POU4F3 JASPAR yes 67340907
chr5 159533491 159533507 POU4F2 JASPAR yes 70751140
chr5 159533491 159533507 POU4F3 JASPAR yes 70751141
chr5 159533493 159533507 POU4F1 JASPAR yes 67340908
chr5 159533493 159533507 POU4F1 JASPAR yes 70751142
chr5 159533508 159533522 FOXF2 JASPAR yes 67340909
chr5 159533508 159533522 FOXF2 JASPAR yes 70751143
chr5 159533508 159533523 FOXP1 JASPAR yes 67340910
chr5 159533508 159533523 FOXP1 JASPAR yes 70751144
chr5 159533509 159533520 FOXA1 JASPAR yes 67340911
chr5 159533509 159533520 FOXA1 JASPAR yes 70751145
chr5 159533509 159533524 FOXA1 JASPAR yes 67340912
chr5 159533509 159533524 FOXA1 JASPAR yes 70751146
chr5 159533510 159533521 FOXB1 JASPAR yes 67340913
chr5 159533510 159533521 FOXC1 JASPAR yes 67340914
chr5 159533510 159533521 FOXB1 JASPAR yes 70751147
chr5 159533510 159533521 FOXC1 JASPAR yes 70751148
chr5 159533510 159533522 FOXC2 JASPAR yes 67340915
chr5 159533510 159533522 FOXC2 JASPAR yes 70751149
chr5 159533511 159533522 FOXP2 JASPAR yes 67340916
chr5 159533511 159533522 FOXP2 JASPAR yes 70751150
chr5 159533511 159533523 FOXI1 JASPAR yes 67340917
chr5 159533511 159533523 FOXI1 JASPAR yes 70751151
chr5 159533513 159533521 FOXG1 JASPAR yes 67340918
chr5 159533513 159533521 FOXO3 JASPAR yes 67340919
chr5 159533513 159533521 FOXG1 JASPAR yes 70751152
chr5 159533513 159533521 FOXO3 JASPAR yes 70751153
chr5 159533531 159533542 TBX20 JASPAR yes 67340920
chr5 159533531 159533542 TBX20 JASPAR yes 70751154
chr5 159533532 159533542 TBX21 JASPAR yes 67340921
chr5 159533532 159533542 TBX21 JASPAR yes 70751155
chr5 159533537 159533547 HOXA13 JASPAR yes 67340922
chr5 159533537 159533547 HOXA13 JASPAR yes 70751156
chr5 159533538 159533542 YY1 TRANSFAC yes 67340923
chr5 159533538 159533542 YY1 TRANSFAC yes 70751157
chr5 159533539 159533554 FOXP1 JASPAR yes 67340924
chr5 159533539 159533554 FOXP1 JASPAR yes 70751158
chr5 159533541 159533547 TBP TRANSFAC yes 67340925
chr5 159533541 159533547 TBP TRANSFAC yes 70751159
chr5 159533541 159533552 FOXC1 JASPAR yes 67340926
chr5 159533541 159533552 FOXC1 JASPAR yes 70751160
chr5 159533542 159533553 FOXP2 JASPAR yes 67340927
chr5 159533542 159533553 FOXP2 JASPAR yes 70751161
chr5 159533554 159533566 POU2F1 JASPAR yes 67340928
chr5 159533554 159533566 POU2F1 JASPAR yes 70751162
chr5 159533554 159533567 POU3F3 JASPAR yes 67340929
chr5 159533554 159533567 POU3F3 JASPAR yes 70751163
chr5 159533554 159533568 POU1F1 JASPAR yes 67340930
chr5 159533554 159533568 POU1F1 JASPAR yes 70751164
chr5 159533555 159533567 POU3F1 JASPAR yes 67340931
chr5 159533555 159533567 POU3F2 JASPAR yes 67340932
chr5 159533555 159533567 POU3F1 JASPAR yes 70751165
chr5 159533555 159533567 POU3F2 JASPAR yes 70751166
chr5 159533555 159533568 POU2F2 JASPAR yes 67340933
chr5 159533555 159533568 POU2F2 JASPAR yes 70751167
chr5 159533556 159533565 POU3F4 JASPAR yes 67340934
chr5 159533556 159533565 POU5F1B JASPAR yes 67340935
chr5 159533556 159533565 POU3F4 JASPAR yes 70751168
chr5 159533556 159533565 POU5F1B JASPAR yes 70751169
chr5 159533558 159533579 IRF1 JASPAR yes 67340936
chr5 159533558 159533579 IRF1 JASPAR yes 70751170
chr5 159533561 159533575 IRF7 JASPAR yes 67340937
chr5 159533561 159533575 IRF7 JASPAR yes 70751171
chr5 159533562 159533576 STAT1 JASPAR yes 67340938
chr5 159533562 159533576 STAT1 JASPAR yes 70751172
chr5 159533562 159533577 PRDM1 JASPAR yes 67340939
chr5 159533562 159533577 STAT2 JASPAR yes 67340940
chr5 159533562 159533577 PRDM1 JASPAR yes 70751173
chr5 159533562 159533577 STAT2 JASPAR yes 70751174
chr5 159533574 159533581 NKX3-1 JASPAR yes 67340941
chr5 159533574 159533581 NKX3-1 JASPAR yes 70751175
chr5 159533584 159533594 GSC2 JASPAR yes 67340942
chr5 159533584 159533594 GSC JASPAR yes 67340943
chr5 159533584 159533594 GSC2 JASPAR yes 70751176
chr5 159533584 159533594 GSC JASPAR yes 70751177
chr5 159533585 159533593 RHOXF1 JASPAR yes 67340944
chr5 159533585 159533593 RHOXF1 JASPAR yes 70751178
chr5 159533585 159533594 PITX3 JASPAR yes 67340945
chr5 159533585 159533594 PITX3 JASPAR yes 70751179
chr5 159533607 159533618 FOXH1 JASPAR yes 67340946
chr5 159533607 159533618 FOXH1 JASPAR yes 70751180
chr5 159533611 159533617 ZNF354C JASPAR yes 67340947
chr5 159533611 159533617 ZNF354C JASPAR yes 70751181
chr5 159533640 159533654 RORA JASPAR yes 67340948
chr5 159533640 159533654 RORA JASPAR yes 70751182
chr5 159533646 159533660 RXRB JASPAR yes 67340949
chr5 159533646 159533660 RXRG JASPAR yes 67340950
chr5 159533646 159533660 RXRB JASPAR yes 70751183
chr5 159533646 159533660 RXRG JASPAR yes 70751184
chr5 159533651 159533666 FOXP1 JASPAR yes 67340951
chr5 159533651 159533666 FOXP1 JASPAR yes 70751185
chr5 159533659 159533673 STAT1 JASPAR yes 67340952
chr5 159533659 159533673 STAT1 JASPAR yes 70751186
chr5 159533659 159533674 PRDM1 JASPAR yes 67340953
chr5 159533659 159533674 STAT2 JASPAR yes 67340954
chr5 159533659 159533674 PRDM1 JASPAR yes 70751187
chr5 159533659 159533674 STAT2 JASPAR yes 70751188
chr5 159533660 159533666 HiNF-A TRANSFAC yes 67340955
chr5 159533660 159533666 HiNF-A TRANSFAC yes 70751189
chr5 159533660 159533672 IRF1 JASPAR yes 67340956
chr5 159533660 159533672 IRF1 JASPAR yes 70751190
chr5 159533661 159533675 POU1F1 JASPAR yes 67340957
chr5 159533661 159533675 POU1F1 JASPAR yes 70751191
chr5 159533662 159533674 POU3F1 JASPAR yes 67340958
chr5 159533662 159533674 POU3F2 JASPAR yes 67340959
chr5 159533662 159533674 POU3F1 JASPAR yes 70751192
chr5 159533662 159533674 POU3F2 JASPAR yes 70751193
chr5 159533662 159533675 POU2F2 JASPAR yes 67340960
chr5 159533662 159533675 POU2F2 JASPAR yes 70751194
chr5 159533666 159533683 ZNF410 JASPAR yes 67340961
chr5 159533666 159533683 ZNF410 JASPAR yes 70751195
chr5 159533697 159533705 FEV JASPAR yes 67340962
chr5 159533697 159533705 FEV JASPAR yes 70751196
chr5 159533705 159533709 YY1 TRANSFAC yes 67340963
chr5 159533705 159533709 YY1 TRANSFAC yes 70751197
SNP sites on vista49909[chr5:159533500-159533764]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 159533536 rs560741155 A G
TBX20 TBX21
8657735
chr5 159533550 rs541641402 C A
FOXC1 FOXP1 FOXP2
8657736
chr5 159533570 rs561408464 G T
IRF1 IRF7 PRDM1 STAT1 STAT2
8657737
Genes possibly regulated by vista49909[chr5:159533500-159533764]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 159436120 159492550 + TTC1 ENSG00000113312.6 159436120 0.53 0.99 5939 2620
chr5 159488808 159546430 - PWWP2A ENSG00000170234.8 159546430 0.68 0.99 5940 87334
chr5 159614374 159665742 + FABP6 ENSG00000170231.11 159614374 0.93 1.0 5941 19390
Expression level of Genes
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miRNAs possibly regulated by vista49909[chr5:159533500-159533764]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results