EnhancerDB
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  3. vista49911[chr5:159592107-159592427]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49911[chr5:159592107-159592427]
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Tissue distribution of vista49911
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Transcription factor that possibly regulate vista49911[chr5:159592107-159592427]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 159591962 159593679 POLR2A UCSC Txn Factor no Conserved 108537258
chr5 159591962 159593679 POLR2A UCSC Txn Factor no Conserved 108537259
chr5 159592165 159592186 ZNF263 JASPAR yes 67345159
chr5 159592165 159592186 ZNF263 JASPAR yes 70751333
chr5 159592168 159592183 PRDM1 JASPAR yes 67345160
chr5 159592168 159592183 PRDM1 JASPAR yes 70751334
chr5 159592169 159592184 NR2C2 JASPAR yes 67345161
chr5 159592169 159592184 NR2C2 JASPAR yes 70751335
chr5 159592189 159592193 NFE TRANSFAC yes 67345162
chr5 159592189 159592193 NFE TRANSFAC yes 70751336
chr5 159592190 159592195 GATA2 JASPAR yes 67345163
chr5 159592190 159592195 GATA2 JASPAR yes 70751337
chr5 159592204 159592219 TFAP2A JASPAR yes 67345164
chr5 159592204 159592219 TFAP2C JASPAR yes 67345165
chr5 159592204 159592219 TFAP2A JASPAR yes 70751338
chr5 159592204 159592219 TFAP2C JASPAR yes 70751339
chr5 159592206 159592221 TFAP2A JASPAR yes 67345166
chr5 159592206 159592221 TFAP2C JASPAR yes 67345167
chr5 159592206 159592221 TFAP2A JASPAR yes 70751340
chr5 159592206 159592221 TFAP2C JASPAR yes 70751341
chr5 159592207 159592218 TFAP2A JASPAR yes 67345168
chr5 159592207 159592218 TFAP2B JASPAR yes 67345169
chr5 159592207 159592218 TFAP2C JASPAR yes 67345170
chr5 159592207 159592218 TFAP2A JASPAR yes 70751342
chr5 159592207 159592218 TFAP2B JASPAR yes 70751343
chr5 159592207 159592218 TFAP2C JASPAR yes 70751344
chr5 159592248 159592262 TLX1 JASPAR yes 67345171
chr5 159592248 159592262 TLX1 JASPAR yes 70751345
chr5 159592259 159592263 NFE TRANSFAC yes 67345172
chr5 159592259 159592263 NFE TRANSFAC yes 70751346
chr5 159592260 159592265 GATA2 JASPAR yes 67345173
chr5 159592260 159592265 GATA2 JASPAR yes 70751347
chr5 159592262 159592273 EBF1 JASPAR yes 67345174
chr5 159592262 159592273 EBF1 JASPAR yes 70751348
chr5 159592267 159592278 NFKB1 JASPAR yes 67345175
chr5 159592267 159592278 NFKB1 JASPAR yes 70751349
chr5 159592273 159592285 ELF1 JASPAR yes 67345176
chr5 159592273 159592285 ELF1 JASPAR yes 70751350
chr5 159592274 159592285 SPDEF JASPAR yes 67345177
chr5 159592274 159592285 SPDEF JASPAR yes 70751351
chr5 159592275 159592284 ELK4 JASPAR yes 67345178
chr5 159592275 159592284 ELK4 JASPAR yes 70751352
chr5 159592275 159592285 ETV3 JASPAR yes 67345179
chr5 159592275 159592285 ETV3 JASPAR yes 70751353
chr5 159592285 159592291 ETS1 JASPAR yes 67345180
chr5 159592285 159592291 SPI1 JASPAR yes 67345181
chr5 159592285 159592291 ETS1 JASPAR yes 70751354
chr5 159592285 159592291 SPI1 JASPAR yes 70751355
chr5 159592320 159592335 RUNX2 JASPAR yes 67345182
chr5 159592320 159592335 RUNX2 JASPAR yes 70751356
chr5 159592329 159592333 ESR1 TRANSFAC yes 67345183
chr5 159592329 159592333 ESR1 TRANSFAC yes 70751357
chr5 159592336 159592349 SMAD2 JASPAR yes 67345184
chr5 159592336 159592349 SMAD2 JASPAR yes 70751358
chr5 159592336 159592350 TLX1 JASPAR yes 67345185
chr5 159592336 159592350 TLX1 JASPAR yes 70751359
chr5 159592337 159592351 TLX1 JASPAR yes 67345186
chr5 159592337 159592351 TLX1 JASPAR yes 70751360
chr5 159592338 159592351 SMAD2 JASPAR yes 67345187
chr5 159592338 159592351 SMAD2 JASPAR yes 70751361
chr5 159592341 159592355 TLX1 JASPAR yes 67345188
chr5 159592341 159592355 TLX1 JASPAR yes 70751362
chr5 159592352 159592366 TLX1 JASPAR yes 67345189
chr5 159592352 159592366 TLX1 JASPAR yes 70751363
chr5 159592353 159592367 TLX1 JASPAR yes 67345190
chr5 159592353 159592367 TLX1 JASPAR yes 70751364
chr5 159592358 159592364 YY1 JASPAR yes 67345191
chr5 159592358 159592364 YY1 JASPAR yes 70751365
chr5 159592371 159592387 ZNF143 JASPAR yes 67345192
chr5 159592371 159592387 ZNF143 JASPAR yes 70751366
chr5 159592382 159592387 ETS2 TRANSFAC yes 67345193
chr5 159592382 159592387 ETS2 TRANSFAC yes 70751367
chr5 159592387 159592401 FOXF2 JASPAR yes 67345194
chr5 159592387 159592401 FOXF2 JASPAR yes 70751368
chr5 159592392 159592400 FOXG1 JASPAR yes 67345195
chr5 159592392 159592400 FOXO3 JASPAR yes 67345196
chr5 159592392 159592400 FOXG1 JASPAR yes 70751369
chr5 159592392 159592400 FOXO3 JASPAR yes 70751370
chr5 159592402 159592415 TFAP2B JASPAR yes 67345197
chr5 159592402 159592415 TFAP2B JASPAR yes 70751371
chr5 159592407 159592412 SP1 TRANSFAC yes 67345198
chr5 159592407 159592412 SP1 TRANSFAC yes 70751372
chr5 159592410 159592414 LFA1 TRANSFAC yes 67345199
chr5 159592410 159592414 LFA1 TRANSFAC yes 70751373
chr5 159592411 159592421 NHLH1 JASPAR yes 67345200
chr5 159592411 159592421 NHLH1 JASPAR yes 70751374
chr5 159592419 159592429 RORA JASPAR yes 67345201
chr5 159592419 159592429 RORA JASPAR yes 70751375
chr5 159592420 159592435 HSF1 JASPAR yes 67345202
chr5 159592420 159592435 HSF1 JASPAR yes 70751376
chr5 159592425 159592440 HSF1 JASPAR yes 67345203
chr5 159592425 159592440 HSF1 JASPAR yes 70751377
chr5 159592426 159592439 HSF1 JASPAR yes 67345204
chr5 159592426 159592439 HSF2 JASPAR yes 67345205
chr5 159592426 159592439 HSF4 JASPAR yes 67345206
chr5 159592426 159592439 HSF1 JASPAR yes 70751378
chr5 159592426 159592439 HSF2 JASPAR yes 70751379
chr5 159592426 159592439 HSF4 JASPAR yes 70751380
SNP sites on vista49911[chr5:159592107-159592427]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 159592220 rs55949627 C T
POLR2A TFAP2A TFAP2C
8658132
chr5 159592279 rs146721858 G A
ELF1 ELK4 ETV3 POLR2A SPDEF
8658133
chr5 159592334 rs546837192 A G
POLR2A RUNX2
8658134
chr5 159592335 rs536888995 G C
POLR2A RUNX2
8658135
chr5 159592380 rs148447264 G A
POLR2A ZNF143
8658136
Genes possibly regulated by vista49911[chr5:159592107-159592427]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 159488808 159546430 - PWWP2A ENSG00000170234.8 159546430 0.68 0.99 5940 54323
chr5 159614374 159665742 + FABP6 ENSG00000170231.11 159614374 0.93 1.0 5941 78053
Expression level of Genes
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miRNAs possibly regulated by vista49911[chr5:159592107-159592427]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results