EnhancerDB
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  3. vista49923[chr5:159861130-159861264]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49923[chr5:159861130-159861264]
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Tissue distribution of vista49923
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Transcription factor that possibly regulate vista49923[chr5:159861130-159861264]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 159861008 159861297 RUNX3 UCSC Txn Factor no Conserved 108537283
chr5 159861099 159861306 PAX5 UCSC Txn Factor no Conserved 108537284
chr5 159861121 159861133 HNF1B JASPAR yes 67355915
chr5 159861121 159861133 HNF1B JASPAR yes 70751962
chr5 159861149 159861161 TEAD1 JASPAR yes 67355916
chr5 159861149 159861161 TEAD1 JASPAR yes 70751963
chr5 159861151 159861159 EHF JASPAR yes 67355917
chr5 159861151 159861159 EHF JASPAR yes 70751964
chr5 159861177 159861196 RFX2 JASPAR yes 67355918
chr5 159861177 159861196 RFX2 JASPAR yes 70751965
chr5 159861178 159861188 RELA JASPAR yes 67355919
chr5 159861178 159861188 RELA JASPAR yes 70751966
chr5 159861181 159861197 RFX2 JASPAR yes 67355920
chr5 159861181 159861197 RFX3 JASPAR yes 67355921
chr5 159861181 159861197 RFX4 JASPAR yes 67355922
chr5 159861181 159861197 RFX5 JASPAR yes 67355923
chr5 159861181 159861197 RFX2 JASPAR yes 70751967
chr5 159861181 159861197 RFX3 JASPAR yes 70751968
chr5 159861181 159861197 RFX4 JASPAR yes 70751969
chr5 159861181 159861197 RFX5 JASPAR yes 70751970
chr5 159861182 159861201 RFX2 JASPAR yes 67355924
chr5 159861182 159861201 RFX2 JASPAR yes 70751971
chr5 159861195 159861207 HES7 JASPAR yes 67355925
chr5 159861195 159861207 HES7 JASPAR yes 70751972
chr5 159861195 159861212 PAX9 JASPAR yes 67355926
chr5 159861195 159861212 PAX9 JASPAR yes 70751973
chr5 159861196 159861215 PAX5 JASPAR yes 67355927
chr5 159861196 159861215 PAX5 JASPAR yes 70751974
chr5 159861212 159861226 SPI1 JASPAR yes 67355928
chr5 159861212 159861226 SPI1 JASPAR yes 70751975
SNP sites on vista49923[chr5:159861130-159861264]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 159861160 rs574769473 C T
PAX5 RUNX3 TEAD1
8659428
chr5 159861229 rs146272690 C T
PAX5 RUNX3
8659429
Genes possibly regulated by vista49923[chr5:159861130-159861264]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 159678659 159772403 - CCNJL ENSG00000135083.10 159772403 0.79 0.99 5942 11273
chr5 159774758 159797648 - C1QTNF2 ENSG00000145861.7 159797648 0.79 0.92 5943 36518
chr5 159820155 159827104 - C5orf54 ENSG00000221886.3 159827104 0.81 0.99 5944 65974
chr5 159828648 159848718 - SLU7 ENSG00000164609.5 159848718 0.67 0.99 5945 87588
chr5 159848829 159855748 + PTTG1 ENSG00000164611.8 159848829 0.92 0.99 5946 87699
Expression level of Genes
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miRNAs possibly regulated by vista49923[chr5:159861130-159861264]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results