EnhancerDB
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  3. vista4993[chr1:212458080-212458253]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4993[chr1:212458080-212458253]
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Tissue distribution of vista4993
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Transcription factor that possibly regulate vista4993[chr1:212458080-212458253]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212457691 212460251 POLR2A UCSC Txn Factor no Conserved 107867982
chr1 212457772 212458506 PHF8 UCSC Txn Factor no Conserved 107867996
chr1 212457878 212458245 RUNX3 UCSC Txn Factor no Conserved 107868011
chr1 212457911 212458535 CTCF UCSC Txn Factor no Conserved 107868018
chr1 212457911 212458627 E2F1 UCSC Txn Factor no Conserved 107868020
chr1 212457959 212458343 USF1 UCSC Txn Factor no Conserved 107868027
chr1 212458042 212458243 PBX3 UCSC Txn Factor no Conserved 107868057
chr1 212458116 212458712 FOS UCSC Txn Factor no Conserved 107868086
chr1 212458098 212458103 NFY TRANSFAC yes 35117704
chr1 212458098 212458103 NFY TRANSFAC yes 118452443
chr1 212458109 212458130 ZNF263 JASPAR yes 35117705
chr1 212458109 212458130 ZNF263 JASPAR yes 118452444
chr1 212458162 212458173 USF1 JASPAR yes 35117706
chr1 212458162 212458173 USF1 JASPAR yes 118452445
chr1 212458164 212458169 USF2 TRANSFAC yes 35117707
chr1 212458164 212458169 USF2 TRANSFAC yes 118452446
chr1 212458164 212458177 NR2F1 JASPAR yes 35117708
chr1 212458164 212458177 NR2F1 JASPAR yes 118452447
chr1 212458168 212458182 NR2F1 JASPAR yes 35117709
chr1 212458168 212458182 NR2F1 JASPAR yes 118452448
chr1 212458168 212458185 RARA JASPAR yes 35117710
chr1 212458168 212458185 RARA JASPAR yes 118452449
chr1 212458191 212458203 HLF JASPAR yes 35117711
chr1 212458191 212458203 HLF JASPAR yes 118452450
chr1 212458196 212458206 TBR1 JASPAR yes 35117712
chr1 212458196 212458206 TBR1 JASPAR yes 118452451
chr1 212458196 212458207 TBX2 JASPAR yes 35117713
chr1 212458196 212458207 TBX2 JASPAR yes 118452452
chr1 212458198 212458201 MYB TRANSFAC yes 35117714
chr1 212458198 212458201 MYB TRANSFAC yes 118452453
chr1 212458198 212458206 MGA JASPAR yes 35117715
chr1 212458198 212458206 TBX15 JASPAR yes 35117716
chr1 212458198 212458206 TBX1 JASPAR yes 35117717
chr1 212458198 212458206 TBX4 JASPAR yes 35117718
chr1 212458198 212458206 TBX5 JASPAR yes 35117719
chr1 212458198 212458206 MGA JASPAR yes 118452454
chr1 212458198 212458206 TBX15 JASPAR yes 118452455
chr1 212458198 212458206 TBX1 JASPAR yes 118452456
chr1 212458198 212458206 TBX4 JASPAR yes 118452457
chr1 212458198 212458206 TBX5 JASPAR yes 118452458
chr1 212458199 212458209 FIGLA JASPAR yes 35117720
chr1 212458199 212458209 ID4 JASPAR yes 35117721
chr1 212458199 212458209 TCF3 JASPAR yes 35117722
chr1 212458199 212458209 TCF4 JASPAR yes 35117723
chr1 212458199 212458209 FIGLA JASPAR yes 118452459
chr1 212458199 212458209 ID4 JASPAR yes 118452460
chr1 212458199 212458209 TCF3 JASPAR yes 118452461
chr1 212458199 212458209 TCF4 JASPAR yes 118452462
chr1 212458201 212458206 USF2 TRANSFAC yes 35117724
chr1 212458201 212458206 USF2 TRANSFAC yes 118452463
chr1 212458212 212458223 E2F4 JASPAR yes 35117725
chr1 212458212 212458223 E2F4 JASPAR yes 118452464
chr1 212458213 212458220 E2F4 TRANSFAC yes 35117726
chr1 212458213 212458220 E2F4 TRANSFAC yes 118452465
chr1 212458213 212458221 E2F1 JASPAR yes 35117727
chr1 212458213 212458221 E2F1 TRANSFAC yes 35117728
chr1 212458213 212458221 E2F1 JASPAR yes 118452466
chr1 212458213 212458221 E2F1 TRANSFAC yes 118452467
chr1 212458213 212458224 E2F1 JASPAR yes 35117729
chr1 212458213 212458224 E2F1 JASPAR yes 118452468
chr1 212458213 212458225 E2F1 JASPAR yes 35117730
chr1 212458213 212458225 E2F1 JASPAR yes 118452469
chr1 212458224 212458236 TFAP2A JASPAR yes 35117731
chr1 212458224 212458236 TFAP2A JASPAR yes 118452470
chr1 212458234 212458249 NFYB JASPAR yes 35117732
chr1 212458234 212458249 NFYB JASPAR yes 118452471
chr1 212458236 212458252 NFYA JASPAR yes 35117733
chr1 212458236 212458252 NFYA JASPAR yes 118452472
chr1 212458241 212458245 H1TF2 TRANSFAC yes 35117734
chr1 212458241 212458245 NFE TRANSFAC yes 35117735
chr1 212458241 212458245 SRF TRANSFAC yes 35117736
chr1 212458241 212458245 H1TF2 TRANSFAC yes 118452473
chr1 212458241 212458245 NFE TRANSFAC yes 118452474
chr1 212458241 212458245 SRF TRANSFAC yes 118452475
SNP sites on vista4993[chr1:212458080-212458253]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212458123 rs351412 C T
CTCF E2F1 FOS PBX3 PHF8 POLR2A RUNX3 USF1 ZNF263
922216
chr1 212458127 rs76606646 C T
CTCF E2F1 FOS PBX3 PHF8 POLR2A RUNX3 USF1 ZNF263
922217
chr1 212458242 rs114170887 C A
CTCF E2F1 FOS H1TF2 NFE NFYA NFYB PBX3 PHF8 POLR2A RUNX3 SRF USF1
922218
Genes possibly regulated by vista4993[chr1:212458080-212458253]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212458879 212535200 + PPP2R5A ENSG00000066027.7 212458879 0.76 0.99 1825 99374
Expression level of Genes
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miRNAs possibly regulated by vista4993[chr1:212458080-212458253]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results