EnhancerDB
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  3. vista49930[chr5:159898090-159898629]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49930[chr5:159898090-159898629]
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Tissue distribution of vista49930
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Transcription factor that possibly regulate vista49930[chr5:159898090-159898629]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 159897243 159898514 POLR2A UCSC Txn Factor no Conserved 108537291
chr5 159898077 159898096 REST JASPAR yes 67360238
chr5 159898077 159898096 REST JASPAR yes 70752216
chr5 159898085 159898100 AR JASPAR yes 67360239
chr5 159898085 159898100 AR JASPAR yes 70752217
chr5 159898097 159898102 ETS2 TRANSFAC yes 67360240
chr5 159898097 159898102 ETS2 TRANSFAC yes 70752218
chr5 159898123 159898137 POU1F1 JASPAR yes 67360241
chr5 159898123 159898137 POU1F1 JASPAR yes 70752219
chr5 159898124 159898136 POU3F2 JASPAR yes 67360242
chr5 159898124 159898136 POU3F2 JASPAR yes 70752220
chr5 159898125 159898136 PROP1 JASPAR yes 67360243
chr5 159898125 159898136 PROP1 JASPAR yes 70752221
chr5 159898142 159898152 NFIA JASPAR yes 67360244
chr5 159898142 159898152 NFIA JASPAR yes 70752222
chr5 159898144 159898150 NFIC JASPAR yes 67360245
chr5 159898144 159898150 NFIC JASPAR yes 70752223
chr5 159898151 159898164 NFKB1 JASPAR yes 67360246
chr5 159898151 159898164 NFKB2 JASPAR yes 67360247
chr5 159898151 159898164 NFKB1 JASPAR yes 70752224
chr5 159898151 159898164 NFKB2 JASPAR yes 70752225
chr5 159898158 159898164 MZF1 JASPAR yes 67360248
chr5 159898158 159898164 MZF1 JASPAR yes 70752226
chr5 159898166 159898187 IRF1 JASPAR yes 67360249
chr5 159898166 159898187 IRF1 JASPAR yes 70752227
chr5 159898167 159898177 REL JASPAR yes 67360250
chr5 159898167 159898177 REL JASPAR yes 70752228
chr5 159898167 159898178 NFKB1 JASPAR yes 67360251
chr5 159898167 159898178 NFKB1 JASPAR yes 70752229
chr5 159898168 159898183 PRDM1 JASPAR yes 67360252
chr5 159898168 159898183 PRDM1 JASPAR yes 70752230
chr5 159898173 159898187 RXRB JASPAR yes 67360253
chr5 159898173 159898187 RXRB JASPAR yes 70752231
chr5 159898180 159898192 PKNOX2 JASPAR yes 67360254
chr5 159898180 159898192 TGIF1 JASPAR yes 67360255
chr5 159898180 159898192 PKNOX2 JASPAR yes 70752232
chr5 159898180 159898192 TGIF1 JASPAR yes 70752233
chr5 159898189 159898192 MYB TRANSFAC yes 67360256
chr5 159898189 159898192 MYB TRANSFAC yes 70752234
chr5 159898199 159898205 TCF1 TRANSFAC yes 67360257
chr5 159898199 159898205 TCF1 TRANSFAC yes 70752235
chr5 159898215 159898223 RHOXF1 JASPAR yes 67360258
chr5 159898215 159898223 RHOXF1 JASPAR yes 70752236
chr5 159898244 159898254 MYF6 JASPAR yes 67360259
chr5 159898244 159898254 MYF6 JASPAR yes 70752237
chr5 159898247 159898258 RUNX1 JASPAR yes 67360260
chr5 159898247 159898258 RUNX1 JASPAR yes 70752238
chr5 159898248 159898258 RUNX3 JASPAR yes 67360261
chr5 159898248 159898258 RUNX3 JASPAR yes 70752239
chr5 159898249 159898258 RUNX2 JASPAR yes 67360262
chr5 159898249 159898258 RUNX2 JASPAR yes 70752240
chr5 159898265 159898279 IRF8 JASPAR yes 67360263
chr5 159898265 159898279 IRF8 JASPAR yes 70752241
chr5 159898279 159898285 TCF4 TRANSFAC yes 67360264
chr5 159898279 159898285 TCF4 TRANSFAC yes 70752242
chr5 159898314 159898320 GATA3 JASPAR yes 67360265
chr5 159898314 159898320 GATA3 JASPAR yes 70752243
chr5 159898322 159898334 PKNOX1 JASPAR yes 67360266
chr5 159898322 159898334 TGIF1 JASPAR yes 67360267
chr5 159898322 159898334 TGIF2 JASPAR yes 67360268
chr5 159898322 159898334 PKNOX1 JASPAR yes 70752244
chr5 159898322 159898334 TGIF1 JASPAR yes 70752245
chr5 159898322 159898334 TGIF2 JASPAR yes 70752246
chr5 159898328 159898332 NFE TRANSFAC yes 67360269
chr5 159898328 159898332 NFE TRANSFAC yes 70752247
chr5 159898344 159898353 SOX9 JASPAR yes 67360270
chr5 159898344 159898353 SOX9 JASPAR yes 70752248
chr5 159898346 159898355 SRY JASPAR yes 67360271
chr5 159898346 159898355 SRY JASPAR yes 70752249
chr5 159898373 159898380 SPI1 JASPAR yes 67360272
chr5 159898373 159898380 SPI1 JASPAR yes 70752250
chr5 159898373 159898381 EHF JASPAR yes 67360273
chr5 159898373 159898381 EHF JASPAR yes 70752251
chr5 159898397 159898412 MEF2A JASPAR yes 67360274
chr5 159898397 159898412 MEF2A JASPAR yes 70752252
chr5 159898398 159898413 MEF2C JASPAR yes 67360275
chr5 159898398 159898413 MEF2C JASPAR yes 70752253
chr5 159898399 159898411 FOXC2 JASPAR yes 67360276
chr5 159898399 159898411 MEF2A JASPAR yes 67360277
chr5 159898399 159898411 MEF2B JASPAR yes 67360278
chr5 159898399 159898411 MEF2D JASPAR yes 67360279
chr5 159898399 159898411 FOXC2 JASPAR yes 70752254
chr5 159898399 159898411 MEF2A JASPAR yes 70752255
chr5 159898399 159898411 MEF2B JASPAR yes 70752256
chr5 159898399 159898411 MEF2D JASPAR yes 70752257
chr5 159898400 159898410 MEF2A JASPAR yes 67360280
chr5 159898400 159898410 MEF2A JASPAR yes 70752258
chr5 159898400 159898411 FOXC1 JASPAR yes 67360281
chr5 159898400 159898411 FOXC1 JASPAR yes 70752259
chr5 159898401 159898405 YY1 TRANSFAC yes 67360282
chr5 159898401 159898405 YY1 TRANSFAC yes 70752260
chr5 159898403 159898418 MEF2A JASPAR yes 67360283
chr5 159898403 159898418 MEF2A JASPAR yes 70752261
chr5 159898404 159898419 MEF2C JASPAR yes 67360284
chr5 159898404 159898419 MEF2C JASPAR yes 70752262
chr5 159898405 159898417 MEF2A JASPAR yes 67360285
chr5 159898405 159898417 MEF2D JASPAR yes 67360286
chr5 159898405 159898417 MEF2A JASPAR yes 70752263
chr5 159898405 159898417 MEF2D JASPAR yes 70752264
chr5 159898407 159898419 FOXC2 JASPAR yes 67360287
chr5 159898407 159898419 FOXC2 JASPAR yes 70752265
chr5 159898407 159898421 FOXF2 JASPAR yes 67360288
chr5 159898407 159898421 FOXF2 JASPAR yes 70752266
chr5 159898408 159898419 FOXB1 JASPAR yes 67360289
chr5 159898408 159898419 FOXC1 JASPAR yes 67360290
chr5 159898408 159898419 FOXB1 JASPAR yes 70752267
chr5 159898408 159898419 FOXC1 JASPAR yes 70752268
chr5 159898409 159898413 YY1 TRANSFAC yes 67360291
chr5 159898409 159898413 YY1 TRANSFAC yes 70752269
chr5 159898433 159898443 HOXA13 JASPAR yes 67360292
chr5 159898433 159898443 HOXB13 JASPAR yes 67360293
chr5 159898433 159898443 HOXD13 JASPAR yes 67360294
chr5 159898433 159898443 HOXA13 JASPAR yes 70752270
chr5 159898433 159898443 HOXB13 JASPAR yes 70752271
chr5 159898433 159898443 HOXD13 JASPAR yes 70752272
chr5 159898433 159898444 HOXA10 JASPAR yes 67360295
chr5 159898433 159898444 HOXA10 JASPAR yes 70752273
chr5 159898434 159898443 CDX1 JASPAR yes 67360296
chr5 159898434 159898443 CDX1 JASPAR yes 70752274
chr5 159898434 159898445 CDX2 JASPAR yes 67360297
chr5 159898434 159898445 CDX2 JASPAR yes 70752275
chr5 159898441 159898447 YY1 JASPAR yes 67360298
chr5 159898441 159898447 YY1 JASPAR yes 70752276
chr5 159898453 159898466 POU2F2 JASPAR yes 67360299
chr5 159898453 159898466 POU2F2 JASPAR yes 70752277
chr5 159898453 159898467 POU1F1 JASPAR yes 67360300
chr5 159898453 159898467 POU1F1 JASPAR yes 70752278
chr5 159898454 159898466 POU3F1 JASPAR yes 67360301
chr5 159898454 159898466 POU3F2 JASPAR yes 67360302
chr5 159898454 159898466 POU3F1 JASPAR yes 70752279
chr5 159898454 159898466 POU3F2 JASPAR yes 70752280
chr5 159898454 159898467 POU3F3 JASPAR yes 67360303
chr5 159898454 159898467 POU3F3 JASPAR yes 70752281
chr5 159898455 159898459 YY1 TRANSFAC yes 67360304
chr5 159898455 159898459 YY1 TRANSFAC yes 70752282
chr5 159898455 159898467 POU2F1 JASPAR yes 67360305
chr5 159898455 159898467 POU2F1 JASPAR yes 70752283
chr5 159898456 159898463 POU2F1 TRANSFAC yes 67360306
chr5 159898456 159898463 POU2F2C TRANSFAC yes 67360307
chr5 159898456 159898463 POU2F2 TRANSFAC yes 67360308
chr5 159898456 159898463 POU2F1 TRANSFAC yes 70752284
chr5 159898456 159898463 POU2F2C TRANSFAC yes 70752285
chr5 159898456 159898463 POU2F2 TRANSFAC yes 70752286
chr5 159898456 159898464 POU2F1 TRANSFAC yes 67360309
chr5 159898456 159898464 POU2F1 TRANSFAC yes 70752287
chr5 159898456 159898465 POU3F4 JASPAR yes 67360310
chr5 159898456 159898465 POU5F1B JASPAR yes 67360311
chr5 159898456 159898465 POU3F4 JASPAR yes 70752288
chr5 159898456 159898465 POU5F1B JASPAR yes 70752289
chr5 159898461 159898465 YY1 TRANSFAC yes 67360312
chr5 159898461 159898465 YY1 TRANSFAC yes 70752290
chr5 159898470 159898474 NFE TRANSFAC yes 67360313
chr5 159898470 159898474 NFE TRANSFAC yes 70752291
chr5 159898489 159898493 YY1 TRANSFAC yes 67360314
chr5 159898489 159898493 YY1 TRANSFAC yes 70752292
chr5 159898504 159898508 TEAD2 TRANSFAC yes 67360315
chr5 159898504 159898508 TEAD2 TRANSFAC yes 70752293
chr5 159898517 159898529 POU3F1 JASPAR yes 67360316
chr5 159898517 159898529 POU3F1 JASPAR yes 70752294
chr5 159898520 159898535 HNF1A JASPAR yes 67360317
chr5 159898520 159898535 HNF1A JASPAR yes 70752295
chr5 159898521 159898534 HNF1B JASPAR yes 67360318
chr5 159898521 159898534 HNF1B JASPAR yes 70752296
chr5 159898526 159898534 FOXO3 JASPAR yes 67360319
chr5 159898526 159898534 FOXO3 JASPAR yes 70752297
chr5 159898529 159898547 SRF JASPAR yes 67360320
chr5 159898529 159898547 SRF JASPAR yes 70752298
chr5 159898530 159898537 SPIB JASPAR yes 67360321
chr5 159898530 159898537 SPIB JASPAR yes 70752299
chr5 159898551 159898558 SPIB JASPAR yes 67360322
chr5 159898551 159898558 SPIB JASPAR yes 70752300
chr5 159898557 159898572 MEF2C JASPAR yes 67360323
chr5 159898557 159898572 MEF2C JASPAR yes 70752301
chr5 159898584 159898588 YY1 TRANSFAC yes 67360324
chr5 159898584 159898588 YY1 TRANSFAC yes 70752302
chr5 159898611 159898632 MAFG JASPAR yes 67360325
chr5 159898611 159898632 MAFG JASPAR yes 70752303
chr5 159898623 159898638 AR JASPAR yes 67360326
chr5 159898623 159898638 AR JASPAR yes 70752304
chr5 159898623 159898640 NR3C1 JASPAR yes 67360327
chr5 159898623 159898640 NR3C2 JASPAR yes 67360328
chr5 159898623 159898640 NR3C1 JASPAR yes 70752305
chr5 159898623 159898640 NR3C2 JASPAR yes 70752306
chr5 159898625 159898640 AR JASPAR yes 67360329
chr5 159898625 159898640 AR JASPAR yes 70752307
SNP sites on vista49930[chr5:159898090-159898629]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 159898139 rs549729587 G C
POLR2A
8659805
chr5 159898179 rs7721623 T A
IRF1 POLR2A PRDM1 RXRB
8659806
chr5 159898194 rs67106969 T C
POLR2A
8659807
chr5 159898198 rs4146605 G A
POLR2A
8659808
chr5 159898488 rs570826007 T C
POLR2A
8659809
chr5 159898607 rs13361237 T C no 8659810
chr5 159898627 rs1592745 C T
AR MAFG NR3C1 NR3C2
8659811
Genes possibly regulated by vista49930[chr5:159898090-159898629]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 159820155 159827104 - C5orf54 ENSG00000221886.3 159827104 0.81 0.99 5944 29014
chr5 159828648 159848718 - SLU7 ENSG00000164609.5 159848718 0.67 0.99 5945 50628
chr5 159848829 159855748 + PTTG1 ENSG00000164611.8 159848829 0.92 0.99 5946 50739
Expression level of Genes
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miRNAs possibly regulated by vista49930[chr5:159898090-159898629]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results