EnhancerDB
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  3. vista49934[chr5:159933217-159933309]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49934[chr5:159933217-159933309]
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Tissue distribution of vista49934
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Transcription factor that possibly regulate vista49934[chr5:159933217-159933309]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 159933223 159933237 ZIC1 JASPAR yes 67363996
chr5 159933223 159933237 ZIC1 JASPAR yes 70752448
chr5 159933223 159933238 ZIC3 JASPAR yes 67363997
chr5 159933223 159933238 ZIC4 JASPAR yes 67363998
chr5 159933223 159933238 ZIC3 JASPAR yes 70752449
chr5 159933223 159933238 ZIC4 JASPAR yes 70752450
chr5 159933229 159933233 NFE TRANSFAC yes 67363999
chr5 159933229 159933233 NFE TRANSFAC yes 70752451
chr5 159933234 159933238 LFA1 TRANSFAC yes 67364000
chr5 159933234 159933238 LFA1 TRANSFAC yes 70752452
chr5 159933289 159933300 ELK4 JASPAR yes 67364001
chr5 159933289 159933300 FLI1 JASPAR yes 67364002
chr5 159933289 159933300 ELK4 JASPAR yes 70752453
chr5 159933289 159933300 FLI1 JASPAR yes 70752454
chr5 159933289 159933302 ELF3 JASPAR yes 67364003
chr5 159933289 159933302 ELF3 JASPAR yes 70752455
chr5 159933290 159933300 ETV6 JASPAR yes 67364004
chr5 159933290 159933300 ETV6 JASPAR yes 70752456
chr5 159933290 159933301 ELF5 JASPAR yes 67364005
chr5 159933290 159933301 ELF5 JASPAR yes 70752457
chr5 159933290 159933302 EHF JASPAR yes 67364006
chr5 159933290 159933302 ELF1 JASPAR yes 67364007
chr5 159933290 159933302 ELF4 JASPAR yes 67364008
chr5 159933290 159933302 EHF JASPAR yes 70752458
chr5 159933290 159933302 ELF1 JASPAR yes 70752459
chr5 159933290 159933302 ELF4 JASPAR yes 70752460
chr5 159933290 159933303 ELF1 JASPAR yes 67364009
chr5 159933290 159933303 ELF1 JASPAR yes 70752461
chr5 159933290 159933304 SPI1 JASPAR yes 67364010
chr5 159933290 159933304 SPI1 JASPAR yes 70752462
chr5 159933291 159933298 SPI1 JASPAR yes 67364011
chr5 159933291 159933298 SPI1 JASPAR yes 70752463
chr5 159933291 159933299 EHF JASPAR yes 67364012
chr5 159933291 159933299 FEV JASPAR yes 67364013
chr5 159933291 159933299 EHF JASPAR yes 70752464
chr5 159933291 159933299 FEV JASPAR yes 70752465
SNP sites on vista49934[chr5:159933217-159933309]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 159933234 rs142176722 C T
LFA1 ZIC1 ZIC3 ZIC4
8660152
Genes possibly regulated by vista49934[chr5:159933217-159933309]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 159828648 159848718 - SLU7 ENSG00000164609.5 159848718 0.67 0.99 5945 15501
chr5 159848829 159855748 + PTTG1 ENSG00000164611.8 159848829 0.92 0.99 5946 15612
Expression level of Genes
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miRNAs possibly regulated by vista49934[chr5:159933217-159933309]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results