EnhancerDB
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  3. vista49943[chr5:160353597-160353673]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49943[chr5:160353597-160353673]
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Tissue distribution of vista49943
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Transcription factor that possibly regulate vista49943[chr5:160353597-160353673]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 160353595 160353606 TBX20 JASPAR yes 67382267
chr5 160353595 160353606 TBX2 JASPAR yes 67382268
chr5 160353595 160353606 TBX20 JASPAR yes 70752812
chr5 160353595 160353606 TBX2 JASPAR yes 70752813
chr5 160353597 160353600 MYB TRANSFAC yes 67382269
chr5 160353597 160353600 MYB TRANSFAC yes 70752814
chr5 160353604 160353608 YY1 TRANSFAC yes 67382270
chr5 160353604 160353608 YY1 TRANSFAC yes 70752815
chr5 160353637 160353648 CDX2 JASPAR yes 67382271
chr5 160353637 160353648 CDX2 JASPAR yes 70752816
chr5 160353638 160353649 HOXA10 JASPAR yes 67382272
chr5 160353638 160353649 HOXA10 JASPAR yes 70752817
chr5 160353639 160353648 CDX1 JASPAR yes 67382273
chr5 160353639 160353648 CDX1 JASPAR yes 70752818
chr5 160353639 160353649 HOXA13 JASPAR yes 67382274
chr5 160353639 160353649 HOXB13 JASPAR yes 67382275
chr5 160353639 160353649 HOXD13 JASPAR yes 67382276
chr5 160353639 160353649 HOXA13 JASPAR yes 70752819
chr5 160353639 160353649 HOXB13 JASPAR yes 70752820
chr5 160353639 160353649 HOXD13 JASPAR yes 70752821
chr5 160353649 160353660 GCM1 JASPAR yes 67382277
chr5 160353649 160353660 GCM1 JASPAR yes 70752822
chr5 160353668 160353674 NFIC JASPAR yes 67382278
chr5 160353668 160353674 NFIC JASPAR yes 70752823
SNP sites on vista49943[chr5:160353597-160353673]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 160353623 rs77943711 G A no 8661998
Genes possibly regulated by vista49943[chr5:160353597-160353673]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 159990127 160279221 - ATP10B ENSG00000118322.8 160279221 0.94 0.95 5947 25624
Expression level of Genes
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miRNAs possibly regulated by vista49943[chr5:160353597-160353673]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results