EnhancerDB
  1. Home
  2. Enhancers
  3. vista49956[chr5:162811410-162811429]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49956[chr5:162811410-162811429]
Back to top
Tissue distribution of vista49956
Back to top
Transcription factor that possibly regulate vista49956[chr5:162811410-162811429]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 162811409 162811424 FOXP1 JASPAR yes 67428026
chr5 162811409 162811424 FOXP1 JASPAR yes 70753241
chr5 162811410 162811425 FOXP1 JASPAR yes 67428027
chr5 162811410 162811425 FOXP1 JASPAR yes 70753242
chr5 162811411 162811417 TBP TRANSFAC yes 67428028
chr5 162811411 162811417 TBP TRANSFAC yes 70753243
chr5 162811411 162811426 FOXP1 JASPAR yes 67428029
chr5 162811411 162811426 FOXP1 JASPAR yes 70753244
chr5 162811411 162811432 IRF1 JASPAR yes 67428030
chr5 162811411 162811432 IRF1 JASPAR yes 70753245
chr5 162811412 162811427 FOXP1 JASPAR yes 67428031
chr5 162811412 162811427 FOXP1 JASPAR yes 70753246
chr5 162811412 162811433 IRF1 JASPAR yes 67428032
chr5 162811412 162811433 IRF1 JASPAR yes 70753247
chr5 162811413 162811428 FOXP1 JASPAR yes 67428033
chr5 162811413 162811428 FOXP1 JASPAR yes 70753248
chr5 162811413 162811434 IRF1 JASPAR yes 67428034
chr5 162811413 162811434 IRF1 JASPAR yes 70753249
chr5 162811414 162811429 FOXP1 JASPAR yes 67428035
chr5 162811414 162811429 FOXP1 JASPAR yes 70753250
chr5 162811414 162811435 IRF1 JASPAR yes 67428036
chr5 162811414 162811435 IRF1 JASPAR yes 70753251
chr5 162811415 162811430 FOXP1 JASPAR yes 67428037
chr5 162811415 162811430 FOXP1 JASPAR yes 70753252
chr5 162811415 162811436 IRF1 JASPAR yes 67428038
chr5 162811415 162811436 IRF1 JASPAR yes 70753253
chr5 162811416 162811431 FOXP1 JASPAR yes 67428039
chr5 162811416 162811431 FOXP1 JASPAR yes 70753254
chr5 162811416 162811437 IRF1 JASPAR yes 67428040
chr5 162811416 162811437 IRF1 JASPAR yes 70753255
chr5 162811417 162811432 FOXP1 JASPAR yes 67428041
chr5 162811417 162811432 FOXP1 JASPAR yes 70753256
chr5 162811418 162811433 FOXP1 JASPAR yes 67428042
chr5 162811418 162811433 FOXP1 JASPAR yes 70753257
chr5 162811419 162811434 FOXP1 JASPAR yes 67428043
chr5 162811419 162811434 FOXP1 JASPAR yes 70753258
chr5 162811419 162811440 IRF1 JASPAR yes 67428044
chr5 162811419 162811440 IRF1 JASPAR yes 70753259
chr5 162811420 162811435 FOXP1 JASPAR yes 67428045
chr5 162811420 162811435 FOXP1 JASPAR yes 70753260
chr5 162811423 162811438 STAT2 JASPAR yes 67428046
chr5 162811423 162811438 STAT2 JASPAR yes 70753261
chr5 162811423 162811441 NR3C1 JASPAR yes 67428047
chr5 162811423 162811441 NR3C1 JASPAR yes 70753262
SNP sites on vista49956[chr5:162811410-162811429]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 162811412 rs539474517 TA T
FOXP1 IRF1 TBP
8666167
chr5 162811412 rs5872815 TA T
FOXP1 IRF1 TBP
8666168
chr5 162811412 rs774812690 TA T
FOXP1 IRF1 TBP
8666169
Genes possibly regulated by vista49956[chr5:162811410-162811429]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 162864575 162873157 + CCNG1 ENSG00000113328.14 162864575 0.64 0.99 5952 46854
chr5 162866447 162873821 - AC112205.1 ENSG00000268800.1 162873821 1.0 1.0 5953 37608
chr5 162873532 162887146 - NUDCD2 ENSG00000170584.6 162887146 0.89 0.99 5954 24283
chr5 162887209 162918947 + HMMR ENSG00000072571.15 162887209 0.96 0.98 5955 24220
Expression level of Genes
Back to top
miRNAs possibly regulated by vista49956[chr5:162811410-162811429]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results