EnhancerDB
  1. Home
  2. Enhancers
  3. vista49961[chr5:163342050-163342264]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49961[chr5:163342050-163342264]
Back to top
Tissue distribution of vista49961
Back to top
Transcription factor that possibly regulate vista49961[chr5:163342050-163342264]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 163341914 163342305 TFAP2C UCSC Txn Factor no Conserved 108537301
chr5 163341917 163342306 TFAP2A UCSC Txn Factor no Conserved 108537302
chr5 163342096 163342111 TFAP2A JASPAR yes 67447183
chr5 163342096 163342111 TFAP2A JASPAR yes 70753440
chr5 163342098 163342111 TFAP2A JASPAR yes 67447184
chr5 163342098 163342111 TFAP2B JASPAR yes 67447185
chr5 163342098 163342111 TFAP2C JASPAR yes 67447186
chr5 163342098 163342111 TFAP2A JASPAR yes 70753441
chr5 163342098 163342111 TFAP2B JASPAR yes 70753442
chr5 163342098 163342111 TFAP2C JASPAR yes 70753443
chr5 163342099 163342108 TFAP2A JASPAR yes 67447187
chr5 163342099 163342108 TFAP2A JASPAR yes 70753444
chr5 163342106 163342110 LFA1 TRANSFAC yes 67447188
chr5 163342106 163342110 LFA1 TRANSFAC yes 70753445
chr5 163342117 163342138 ZNF263 JASPAR yes 67447189
chr5 163342117 163342138 ZNF263 JASPAR yes 70753446
chr5 163342122 163342132 OLIG3 JASPAR yes 67447190
chr5 163342122 163342132 OLIG3 JASPAR yes 70753447
chr5 163342122 163342134 TAL1 JASPAR yes 67447191
chr5 163342122 163342134 TAL1 JASPAR yes 70753448
chr5 163342129 163342134 SP1 TRANSFAC yes 67447192
chr5 163342129 163342134 SP1 TRANSFAC yes 70753449
chr5 163342131 163342136 TFAP2A TRANSFAC yes 67447193
chr5 163342131 163342136 TFAP2A TRANSFAC yes 70753450
chr5 163342131 163342137 MZF1 JASPAR yes 67447194
chr5 163342131 163342137 MZF1 JASPAR yes 70753451
chr5 163342143 163342158 HNF4A JASPAR yes 67447195
chr5 163342143 163342158 HNF4A JASPAR yes 70753452
chr5 163342144 163342159 NR2C2 JASPAR yes 67447196
chr5 163342144 163342159 NR2C2 JASPAR yes 70753453
chr5 163342151 163342167 RFX2 JASPAR yes 67447197
chr5 163342151 163342167 RFX3 JASPAR yes 67447198
chr5 163342151 163342167 RFX4 JASPAR yes 67447199
chr5 163342151 163342167 RFX5 JASPAR yes 67447200
chr5 163342151 163342167 RFX2 JASPAR yes 70753454
chr5 163342151 163342167 RFX3 JASPAR yes 70753455
chr5 163342151 163342167 RFX4 JASPAR yes 70753456
chr5 163342151 163342167 RFX5 JASPAR yes 70753457
chr5 163342152 163342171 RFX2 JASPAR yes 67447201
chr5 163342152 163342171 RFX2 JASPAR yes 70753458
chr5 163342154 163342169 RFX5 JASPAR yes 67447202
chr5 163342154 163342169 RFX5 JASPAR yes 70753459
chr5 163342232 163342251 CTCF JASPAR yes 67447203
chr5 163342232 163342251 CTCF JASPAR yes 70753460
chr5 163342236 163342242 YY1 JASPAR yes 67447204
chr5 163342236 163342242 YY1 JASPAR yes 70753461
SNP sites on vista49961[chr5:163342050-163342264]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 163342128 rs114974753 A G,T
OLIG3 TAL1 TFAP2A TFAP2C ZNF263
8668064
chr5 163342251 rs116497454 G A
CTCF TFAP2A TFAP2C
8668065
Genes possibly regulated by vista49961[chr5:163342050-163342264]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
Back to top
No results
miRNAs possibly regulated by vista49961[chr5:163342050-163342264]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr20 3898188 3898210 + hsa-miR-103a-3p MIMAT0000101 3870033 0.16113250727449502 0.73872 0.0 1035
Expression level of miRNAs
Back to top