EnhancerDB
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  3. vista49962[chr5:163343376-163343683]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49962[chr5:163343376-163343683]
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Tissue distribution of vista49962
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Transcription factor that possibly regulate vista49962[chr5:163343376-163343683]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 163343416 163343731 RUNX3 UCSC Txn Factor no Conserved 108537303
chr5 163343395 163343400 ETS2 TRANSFAC yes 67447332
chr5 163343395 163343400 ETS2 TRANSFAC yes 70753462
chr5 163343397 163343408 FLI1 JASPAR yes 67447333
chr5 163343397 163343408 FLI1 JASPAR yes 70753463
chr5 163343398 163343403 ETS2 TRANSFAC yes 67447334
chr5 163343398 163343403 ETS2 TRANSFAC yes 70753464
chr5 163343398 163343406 EHF JASPAR yes 67447335
chr5 163343398 163343406 EHF JASPAR yes 70753465
chr5 163343403 163343416 NFKB1 JASPAR yes 67447336
chr5 163343403 163343416 NFKB2 JASPAR yes 67447337
chr5 163343403 163343416 NFKB1 JASPAR yes 70753466
chr5 163343403 163343416 NFKB2 JASPAR yes 70753467
chr5 163343404 163343415 NFKB1 JASPAR yes 67447338
chr5 163343404 163343415 NFKB1 JASPAR yes 70753468
chr5 163343483 163343493 TEAD1 JASPAR yes 67447339
chr5 163343483 163343493 TEAD4 JASPAR yes 67447340
chr5 163343483 163343493 TEAD1 JASPAR yes 70753469
chr5 163343483 163343493 TEAD4 JASPAR yes 70753470
chr5 163343483 163343495 TEAD1 JASPAR yes 67447341
chr5 163343483 163343495 TEAD1 JASPAR yes 70753471
chr5 163343484 163343492 TEAD3 JASPAR yes 67447342
chr5 163343484 163343492 TEAD3 JASPAR yes 70753472
chr5 163343504 163343517 POU2F2 JASPAR yes 67447343
chr5 163343504 163343517 POU2F2 JASPAR yes 70753473
chr5 163343513 163343527 RORA JASPAR yes 67447344
chr5 163343513 163343527 RORA JASPAR yes 70753474
chr5 163343519 163343525 ESR1 TRANSFAC yes 67447345
chr5 163343519 163343525 ESR1 TRANSFAC yes 70753475
chr5 163343521 163343525 ESR1 TRANSFAC yes 67447346
chr5 163343521 163343525 ESR1 TRANSFAC yes 70753476
chr5 163343524 163343528 YY1 TRANSFAC yes 67447347
chr5 163343524 163343528 YY1 TRANSFAC yes 70753477
chr5 163343542 163343546 NFE TRANSFAC yes 67447348
chr5 163343542 163343546 NFE TRANSFAC yes 70753478
chr5 163343547 163343561 STAT1 JASPAR yes 67447349
chr5 163343547 163343561 STAT1 JASPAR yes 70753479
chr5 163343548 163343559 ETV2 JASPAR yes 67447350
chr5 163343548 163343559 ETV2 JASPAR yes 70753480
chr5 163343548 163343561 ELF1 JASPAR yes 67447351
chr5 163343548 163343561 ELF1 JASPAR yes 70753481
chr5 163343557 163343572 RUNX2 JASPAR yes 67447352
chr5 163343557 163343572 RUNX2 JASPAR yes 70753482
chr5 163343561 163343571 RUNX3 JASPAR yes 67447353
chr5 163343561 163343571 RUNX3 JASPAR yes 70753483
chr5 163343562 163343571 RUNX2 JASPAR yes 67447354
chr5 163343562 163343571 RUNX2 JASPAR yes 70753484
chr5 163343578 163343583 ETS2 TRANSFAC yes 67447355
chr5 163343578 163343583 ETS2 TRANSFAC yes 70753485
chr5 163343616 163343631 NFYB JASPAR yes 67447356
chr5 163343616 163343631 NFYB JASPAR yes 70753486
chr5 163343618 163343634 NFYA JASPAR yes 67447357
chr5 163343618 163343634 NFYA JASPAR yes 70753487
chr5 163343619 163343637 NFYA JASPAR yes 67447358
chr5 163343619 163343637 NFYA JASPAR yes 70753488
chr5 163343622 163343632 EN2 JASPAR yes 67447359
chr5 163343622 163343632 EN2 JASPAR yes 70753489
chr5 163343623 163343627 H1TF2 TRANSFAC yes 67447360
chr5 163343623 163343627 NFE TRANSFAC yes 67447361
chr5 163343623 163343627 SRF TRANSFAC yes 67447362
chr5 163343623 163343627 H1TF2 TRANSFAC yes 70753490
chr5 163343623 163343627 NFE TRANSFAC yes 70753491
chr5 163343623 163343627 SRF TRANSFAC yes 70753492
chr5 163343649 163343661 MYBL1 JASPAR yes 67447363
chr5 163343649 163343661 MYBL1 JASPAR yes 70753493
chr5 163343651 163343655 YY1 TRANSFAC yes 67447364
chr5 163343651 163343655 YY1 TRANSFAC yes 70753494
chr5 163343654 163343657 MYB TRANSFAC yes 67447365
chr5 163343654 163343657 MYB TRANSFAC yes 70753495
SNP sites on vista49962[chr5:163343376-163343683]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 163343424 rs10056547 A T
RUNX3
8668085
chr5 163343517 rs1422547 C G
POU2F2 RORA RUNX3
8668086
chr5 163343551 rs138406963 T A
ELF1 ETV2 RUNX3 STAT1
8668087
chr5 163343581 rs989922 G A
ETS2 RUNX3
8668088
Genes possibly regulated by vista49962[chr5:163343376-163343683]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista49962[chr5:163343376-163343683]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr20 3898188 3898210 + hsa-miR-103a-3p MIMAT0000101 3870033 0.16118756137821907 0.73872 0.0 1035
Expression level of miRNAs
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