EnhancerDB
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  3. vista4997[chr1:212631237-212631343]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4997[chr1:212631237-212631343]
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Tissue distribution of vista4997
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Transcription factor that possibly regulate vista4997[chr1:212631237-212631343]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212631075 212631494 CTCF UCSC Txn Factor no Conserved 107868276
chr1 212631159 212631449 SMC3 UCSC Txn Factor no Conserved 107868288
chr1 212631163 212631445 RAD21 UCSC Txn Factor no Conserved 107868289
chr1 212631233 212631243 NFIA JASPAR yes 35125390
chr1 212631233 212631243 NFIA JASPAR yes 118452693
chr1 212631235 212631241 NFIC JASPAR yes 35125391
chr1 212631235 212631241 NFIC JASPAR yes 118452694
chr1 212631255 212631261 NFIC JASPAR yes 35125392
chr1 212631255 212631261 NFIC JASPAR yes 118452695
chr1 212631256 212631268 NHLH1 JASPAR yes 35125393
chr1 212631256 212631268 NHLH1 JASPAR yes 118452696
chr1 212631257 212631267 NHLH1 JASPAR yes 35125394
chr1 212631257 212631267 NHLH1 JASPAR yes 118452697
chr1 212631269 212631273 NFE TRANSFAC yes 35125395
chr1 212631269 212631273 NFE TRANSFAC yes 118452698
chr1 212631279 212631298 CTCF JASPAR yes 35125396
chr1 212631279 212631298 CTCF JASPAR yes 118452699
chr1 212631280 212631295 ZIC4 JASPAR yes 35125397
chr1 212631280 212631295 ZIC4 JASPAR yes 118452700
chr1 212631281 212631295 ZIC1 JASPAR yes 35125398
chr1 212631281 212631295 ZIC1 JASPAR yes 118452701
chr1 212631315 212631326 E2F6 JASPAR yes 35125399
chr1 212631315 212631326 E2F6 JASPAR yes 118452702
chr1 212631318 212631329 NFKB1 JASPAR yes 35125400
chr1 212631318 212631329 NFKB1 JASPAR yes 118452703
chr1 212631319 212631324 ETS2 TRANSFAC yes 35125401
chr1 212631319 212631324 ETS2 TRANSFAC yes 118452704
chr1 212631334 212631349 FOXP1 JASPAR yes 35125402
chr1 212631334 212631349 FOXP1 JASPAR yes 118452705
chr1 212631335 212631346 FOXP2 JASPAR yes 35125403
chr1 212631335 212631346 FOXP2 JASPAR yes 118452706
chr1 212631335 212631349 FOXF2 JASPAR yes 35125404
chr1 212631335 212631349 FOXF2 JASPAR yes 118452707
chr1 212631336 212631344 FOXD1 JASPAR yes 35125405
chr1 212631336 212631344 FOXG1 JASPAR yes 35125406
chr1 212631336 212631344 FOXO3 JASPAR yes 35125407
chr1 212631336 212631344 FOXD1 JASPAR yes 118452708
chr1 212631336 212631344 FOXG1 JASPAR yes 118452709
chr1 212631336 212631344 FOXO3 JASPAR yes 118452710
chr1 212631337 212631344 FOXD2 JASPAR yes 35125408
chr1 212631337 212631344 FOXI1 JASPAR yes 35125409
chr1 212631337 212631344 FOXL1 JASPAR yes 35125410
chr1 212631337 212631344 FOXO4 JASPAR yes 35125411
chr1 212631337 212631344 FOXO6 JASPAR yes 35125412
chr1 212631337 212631344 FOXP3 JASPAR yes 35125413
chr1 212631337 212631344 FOXD2 JASPAR yes 118452711
chr1 212631337 212631344 FOXI1 JASPAR yes 118452712
chr1 212631337 212631344 FOXL1 JASPAR yes 118452713
chr1 212631337 212631344 FOXO4 JASPAR yes 118452714
chr1 212631337 212631344 FOXO6 JASPAR yes 118452715
chr1 212631337 212631344 FOXP3 JASPAR yes 118452716
SNP sites on vista4997[chr1:212631237-212631343]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212631290 rs492231 G C,T
CTCF RAD21 SMC3 ZIC1 ZIC4
922970
Genes possibly regulated by vista4997[chr1:212631237-212631343]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212537273 212588243 - TMEM206 ENSG00000065600.8 212588243 0.71 1.0 1826 57006
chr1 212606229 212619714 + NENF ENSG00000117691.5 212606229 0.7 1.0 1827 74992
Expression level of Genes
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miRNAs possibly regulated by vista4997[chr1:212631237-212631343]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results