EnhancerDB
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  3. vista4998[chr1:212643548-212643711]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4998[chr1:212643548-212643711]
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Tissue distribution of vista4998
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Transcription factor that possibly regulate vista4998[chr1:212643548-212643711]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212643453 212643716 FOS UCSC Txn Factor no Conserved 107868319
chr1 212643586 212643601 STAT2 JASPAR yes 35126876
chr1 212643586 212643601 STAT2 JASPAR yes 118452717
chr1 212643587 212643601 STAT1 JASPAR yes 35126877
chr1 212643587 212643601 STAT1 JASPAR yes 118452718
chr1 212643588 212643598 NFATC3 JASPAR yes 35126878
chr1 212643588 212643598 NFATC3 JASPAR yes 118452719
chr1 212643598 212643609 FOSL2 JASPAR yes 35126879
chr1 212643598 212643609 JUNB JASPAR yes 35126880
chr1 212643598 212643609 FOSL2 JASPAR yes 118452720
chr1 212643598 212643609 JUNB JASPAR yes 118452721
chr1 212643599 212643610 FOS JASPAR yes 35126881
chr1 212643599 212643610 FOSL1 JASPAR yes 35126882
chr1 212643599 212643610 JUND JASPAR yes 35126883
chr1 212643599 212643610 FOS JASPAR yes 118452722
chr1 212643599 212643610 FOSL1 JASPAR yes 118452723
chr1 212643599 212643610 JUND JASPAR yes 118452724
chr1 212643601 212643608 JUN TRANSFAC yes 35126884
chr1 212643601 212643608 JUN TRANSFAC yes 118452725
chr1 212643601 212643612 BATF JASPAR yes 35126885
chr1 212643601 212643612 BATF JASPAR yes 118452726
chr1 212643613 212643618 MYC TRANSFAC yes 35126886
chr1 212643613 212643618 MYC TRANSFAC yes 118452727
chr1 212643625 212643635 TFEB JASPAR yes 35126887
chr1 212643625 212643635 TFEC JASPAR yes 35126888
chr1 212643625 212643635 TFEB JASPAR yes 118452728
chr1 212643625 212643635 TFEC JASPAR yes 118452729
chr1 212643625 212643636 USF1 JASPAR yes 35126889
chr1 212643625 212643636 USF2 JASPAR yes 35126890
chr1 212643625 212643636 USF1 JASPAR yes 118452730
chr1 212643625 212643636 USF2 JASPAR yes 118452731
chr1 212643626 212643636 MAX JASPAR yes 35126891
chr1 212643626 212643636 MAX JASPAR yes 118452732
chr1 212643639 212643643 NFE TRANSFAC yes 35126892
chr1 212643639 212643643 NFE TRANSFAC yes 118452733
chr1 212643639 212643644 GATA1 TRANSFAC yes 35126893
chr1 212643639 212643644 GATA1 TRANSFAC yes 118452734
chr1 212643639 212643645 GATA3 JASPAR yes 35126894
chr1 212643639 212643645 GATA3 JASPAR yes 118452735
chr1 212643647 212643653 NFIC JASPAR yes 35126895
chr1 212643647 212643653 NFIC JASPAR yes 118452736
chr1 212643662 212643668 TCF4 TRANSFAC yes 35126896
chr1 212643662 212643668 TCF4 TRANSFAC yes 118452737
chr1 212643671 212643682 STAT3 JASPAR yes 35126897
chr1 212643671 212643682 STAT3 JASPAR yes 118452738
chr1 212643675 212643682 NFATC2 JASPAR yes 35126898
chr1 212643675 212643682 NFATC2 JASPAR yes 118452739
chr1 212643675 212643686 NFKB1 JASPAR yes 35126899
chr1 212643675 212643686 NFKB1 JASPAR yes 118452740
chr1 212643694 212643702 SP1 TRANSFAC yes 35126900
chr1 212643694 212643702 SP1 TRANSFAC yes 118452741
chr1 212643696 212643702 MAZ TRANSFAC yes 35126901
chr1 212643696 212643702 MAZ TRANSFAC yes 118452742
chr1 212643700 212643704 LFA1 TRANSFAC yes 35126902
chr1 212643700 212643704 LFA1 TRANSFAC yes 118452743
SNP sites on vista4998[chr1:212643548-212643711]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212643586 rs545270500 G A
FOS STAT2
923136
chr1 212643623 rs575091387 G A
FOS
923137
chr1 212643660 rs7524087 A G
FOS
923138
chr1 212643665 rs190487000 C G
FOS TCF4
923139
Genes possibly regulated by vista4998[chr1:212643548-212643711]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212537273 212588243 - TMEM206 ENSG00000065600.8 212588243 0.71 1.0 1826 44695
chr1 212606229 212619714 + NENF ENSG00000117691.5 212606229 0.7 1.0 1827 62681
chr1 212738676 212794119 + ATF3 ENSG00000162772.12 212738676 0.8 1.0 1828 5035
Expression level of Genes
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miRNAs possibly regulated by vista4998[chr1:212643548-212643711]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results