EnhancerDB
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  3. vista4999[chr1:212650622-212650921]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4999[chr1:212650622-212650921]
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Tissue distribution of vista4999
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Transcription factor that possibly regulate vista4999[chr1:212650622-212650921]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212650363 212650825 ZNF263 UCSC Txn Factor no Conserved 107868321
chr1 212650463 212650899 RELA UCSC Txn Factor no Conserved 107868327
chr1 212650467 212650874 CTCF UCSC Txn Factor no Conserved 107868328
chr1 212650533 212650810 SMC3 UCSC Txn Factor no Conserved 107868349
chr1 212650553 212650818 RAD21 UCSC Txn Factor no Conserved 107868357
chr1 212650625 212650631 PEA3 TRANSFAC yes 35127536
chr1 212650625 212650631 PEA3 TRANSFAC yes 118452744
chr1 212650654 212650669 HNF4A JASPAR yes 35127537
chr1 212650654 212650669 HNF4A JASPAR yes 118452745
chr1 212650655 212650669 NR2F1 JASPAR yes 35127538
chr1 212650655 212650669 NR2F1 JASPAR yes 118452746
chr1 212650655 212650670 HNF4G JASPAR yes 35127539
chr1 212650655 212650670 HNF4G JASPAR yes 118452747
chr1 212650662 212650681 CTCF JASPAR yes 35127540
chr1 212650662 212650681 CTCF JASPAR yes 118452748
chr1 212650671 212650690 PAX5 JASPAR yes 35127541
chr1 212650671 212650690 PAX5 JASPAR yes 118452749
chr1 212650672 212650691 CTCF JASPAR yes 35127542
chr1 212650672 212650691 CTCF JASPAR yes 118452750
chr1 212650691 212650704 ZBTB18 JASPAR yes 35127543
chr1 212650691 212650704 ZBTB18 JASPAR yes 118452751
chr1 212650703 212650714 NFKB1 JASPAR yes 35127544
chr1 212650703 212650714 NFKB1 JASPAR yes 118452752
chr1 212650704 212650714 NFKB1 JASPAR yes 35127545
chr1 212650704 212650714 RELA JASPAR yes 35127546
chr1 212650704 212650714 NFKB1 JASPAR yes 118452753
chr1 212650704 212650714 RELA JASPAR yes 118452754
chr1 212650704 212650715 NFKB1 JASPAR yes 35127547
chr1 212650704 212650715 NFKB1 JASPAR yes 118452755
chr1 212650705 212650715 RELA JASPAR yes 35127548
chr1 212650705 212650715 REL JASPAR yes 35127549
chr1 212650705 212650715 RELA JASPAR yes 118452756
chr1 212650705 212650715 REL JASPAR yes 118452757
chr1 212650706 212650726 TP53 JASPAR yes 35127550
chr1 212650706 212650726 TP53 JASPAR yes 118452758
chr1 212650707 212650719 INSM1 JASPAR yes 35127551
chr1 212650707 212650719 INSM1 JASPAR yes 118452759
chr1 212650732 212650736 NFE TRANSFAC yes 35127552
chr1 212650732 212650736 NFE TRANSFAC yes 118452760
chr1 212650781 212650787 SOX10 JASPAR yes 35127553
chr1 212650781 212650787 SOX10 JASPAR yes 118452761
chr1 212650792 212650802 NFIA JASPAR yes 35127554
chr1 212650792 212650802 NFIA JASPAR yes 118452762
chr1 212650793 212650802 NFIX JASPAR yes 35127555
chr1 212650793 212650802 NFIX JASPAR yes 118452763
chr1 212650794 212650800 NFIC JASPAR yes 35127556
chr1 212650794 212650800 NFIC JASPAR yes 118452764
chr1 212650795 212650807 PKNOX1 JASPAR yes 35127557
chr1 212650795 212650807 PKNOX2 JASPAR yes 35127558
chr1 212650795 212650807 TGIF1 JASPAR yes 35127559
chr1 212650795 212650807 TGIF2 JASPAR yes 35127560
chr1 212650795 212650807 PKNOX1 JASPAR yes 118452765
chr1 212650795 212650807 PKNOX2 JASPAR yes 118452766
chr1 212650795 212650807 TGIF1 JASPAR yes 118452767
chr1 212650795 212650807 TGIF2 JASPAR yes 118452768
chr1 212650800 212650814 XBP1 JASPAR yes 35127561
chr1 212650800 212650814 XBP1 JASPAR yes 118452769
chr1 212650801 212650815 CREB3 JASPAR yes 35127562
chr1 212650801 212650815 CREB3 JASPAR yes 118452770
chr1 212650805 212650817 YY1 JASPAR yes 35127563
chr1 212650805 212650817 YY1 JASPAR yes 118452771
chr1 212650808 212650814 YY1 JASPAR yes 35127564
chr1 212650808 212650814 YY1 JASPAR yes 118452772
chr1 212650839 212650855 SOX4 JASPAR yes 35127565
chr1 212650839 212650855 SOX4 JASPAR yes 118452773
chr1 212650840 212650855 SOX21 JASPAR yes 35127566
chr1 212650840 212650855 SOX21 JASPAR yes 118452774
chr1 212650841 212650852 ESRRA JASPAR yes 35127567
chr1 212650841 212650852 ESRRA JASPAR yes 118452775
chr1 212650845 212650849 LFA1 TRANSFAC yes 35127568
chr1 212650845 212650849 LFA1 TRANSFAC yes 118452776
chr1 212650851 212650866 HNF1A JASPAR yes 35127569
chr1 212650851 212650866 HNF1A JASPAR yes 118452777
chr1 212650852 212650865 HNF1B JASPAR yes 35127570
chr1 212650852 212650865 HNF1B JASPAR yes 118452778
chr1 212650854 212650860 TBP TRANSFAC yes 35127571
chr1 212650854 212650860 TBP TRANSFAC yes 118452779
chr1 212650865 212650876 CEBPA JASPAR yes 35127572
chr1 212650865 212650876 CEBPA JASPAR yes 118452780
chr1 212650872 212650884 IRF1 JASPAR yes 35127573
chr1 212650872 212650884 IRF1 JASPAR yes 118452781
chr1 212650876 212650891 SCRT1 JASPAR yes 35127574
chr1 212650876 212650891 SCRT1 JASPAR yes 118452782
chr1 212650884 212650894 EN2 JASPAR yes 35127575
chr1 212650884 212650894 GBX1 JASPAR yes 35127576
chr1 212650884 212650894 EN2 JASPAR yes 118452783
chr1 212650884 212650894 GBX1 JASPAR yes 118452784
chr1 212650885 212650893 BSX JASPAR yes 35127577
chr1 212650885 212650893 DLX6 JASPAR yes 35127578
chr1 212650885 212650893 MSX1 JASPAR yes 35127579
chr1 212650885 212650893 MSX2 JASPAR yes 35127580
chr1 212650885 212650893 BSX JASPAR yes 118452785
chr1 212650885 212650893 DLX6 JASPAR yes 118452786
chr1 212650885 212650893 MSX1 JASPAR yes 118452787
chr1 212650885 212650893 MSX2 JASPAR yes 118452788
chr1 212650888 212650909 IRF1 JASPAR yes 35127581
chr1 212650888 212650909 IRF1 JASPAR yes 118452789
chr1 212650889 212650899 RELA JASPAR yes 35127582
chr1 212650889 212650899 RELA JASPAR yes 118452790
chr1 212650890 212650905 PRDM1 JASPAR yes 35127583
chr1 212650890 212650905 STAT2 JASPAR yes 35127584
chr1 212650890 212650905 PRDM1 JASPAR yes 118452791
chr1 212650890 212650905 STAT2 JASPAR yes 118452792
chr1 212650891 212650905 STAT1 JASPAR yes 35127585
chr1 212650891 212650905 STAT1 JASPAR yes 118452793
chr1 212650893 212650914 IRF1 JASPAR yes 35127586
chr1 212650893 212650914 IRF1 JASPAR yes 118452794
chr1 212650894 212650915 IRF1 JASPAR yes 35127587
chr1 212650894 212650915 IRF1 JASPAR yes 118452795
chr1 212650895 212650900 ETS2 TRANSFAC yes 35127588
chr1 212650895 212650900 ETS2 TRANSFAC yes 118452796
chr1 212650895 212650916 IRF1 JASPAR yes 35127589
chr1 212650895 212650916 IRF1 JASPAR yes 118452797
chr1 212650896 212650917 IRF1 JASPAR yes 35127590
chr1 212650896 212650917 IRF1 JASPAR yes 118452798
chr1 212650897 212650912 FOXP1 JASPAR yes 35127591
chr1 212650897 212650912 FOXP1 JASPAR yes 118452799
chr1 212650897 212650918 IRF1 JASPAR yes 35127592
chr1 212650897 212650918 IRF1 JASPAR yes 118452800
chr1 212650898 212650913 FOXP1 JASPAR yes 35127593
chr1 212650898 212650913 FOXP1 JASPAR yes 118452801
chr1 212650898 212650919 IRF1 JASPAR yes 35127594
chr1 212650898 212650919 IRF1 JASPAR yes 118452802
chr1 212650899 212650914 FOXP1 JASPAR yes 35127595
chr1 212650899 212650914 FOXP1 JASPAR yes 118452803
chr1 212650899 212650920 IRF1 JASPAR yes 35127596
chr1 212650899 212650920 IRF1 JASPAR yes 118452804
chr1 212650900 212650915 FOXP1 JASPAR yes 35127597
chr1 212650900 212650915 FOXP1 JASPAR yes 118452805
chr1 212650901 212650916 FOXP1 JASPAR yes 35127598
chr1 212650901 212650916 FOXP1 JASPAR yes 118452806
chr1 212650902 212650917 FOXP1 JASPAR yes 35127599
chr1 212650902 212650917 FOXP1 JASPAR yes 118452807
chr1 212650903 212650918 FOXP1 JASPAR yes 35127600
chr1 212650903 212650918 FOXP1 JASPAR yes 118452808
chr1 212650904 212650919 FOXP1 JASPAR yes 35127601
chr1 212650904 212650919 FOXP1 JASPAR yes 118452809
chr1 212650905 212650920 FOXP1 JASPAR yes 35127602
chr1 212650905 212650920 FOXP1 JASPAR yes 118452810
chr1 212650906 212650921 FOXP1 JASPAR yes 35127603
chr1 212650906 212650921 FOXP1 JASPAR yes 118452811
chr1 212650907 212650922 FOXP1 JASPAR yes 35127604
chr1 212650907 212650922 FOXP1 JASPAR yes 118452812
SNP sites on vista4999[chr1:212650622-212650921]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212650816 rs74140027 T G
CTCF RAD21 RELA YY1 ZNF263
923221
chr1 212650876 rs9970664 A G
CEBPA IRF1 RELA SCRT1
923222
Genes possibly regulated by vista4999[chr1:212650622-212650921]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212537273 212588243 - TMEM206 ENSG00000065600.8 212588243 0.71 1.0 1826 37621
chr1 212606229 212619714 + NENF ENSG00000117691.5 212606229 0.7 1.0 1827 55607
chr1 212738676 212794119 + ATF3 ENSG00000162772.12 212738676 0.8 1.0 1828 12245
Expression level of Genes
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miRNAs possibly regulated by vista4999[chr1:212650622-212650921]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results